RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 NLRP10Q86W26 655 aa34.74■■■■□ 3.15
TRAPPC10-202ENST00000380221 USP42Q9H9J4 1324 aaKnown RBP34.74■■■■□ 3.15
TRAPPC10-202ENST00000380221 IGHDP01880 384 aa34.74■■■■□ 3.15
TRAPPC10-202ENST00000380221 CENPQQ7L2Z9 268 aaPredicted RBP34.74■■■■□ 3.15
TRAPPC10-202ENST00000380221 UBN2Q6ZU65 1347 aa34.73■■■■□ 3.15
TRAPPC10-202ENST00000380221 TUBGCP6Q96RT7 1819 aa34.73■■■■□ 3.15
TRAPPC10-202ENST00000380221 UBE3BQ7Z3V4 1068 aa34.73■■■■□ 3.15
TRAPPC10-202ENST00000380221 RTL5Q5HYW3 569 aaPredicted RBP34.72■■■■□ 3.15
TRAPPC10-202ENST00000380221 CEP85Q6P2H3 762 aa34.72■■■■□ 3.15
TRAPPC10-202ENST00000380221 SIRT2Q8IXJ6 389 aa34.72■■■■□ 3.15
TRAPPC10-202ENST00000380221 NIP7Q9Y221 180 aaKnown RBP eCLIP34.72■■■■□ 3.15
TRAPPC10-202ENST00000380221 H7C1W4 665 aa34.71■■■■□ 3.15
TRAPPC10-202ENST00000380221 ANO8Q9HCE9 1232 aaPredicted RBP34.71■■■■□ 3.15
TRAPPC10-202ENST00000380221 RGL2O15211 777 aa34.7■■■■□ 3.15
TRAPPC10-202ENST00000380221 CASP7P55210 303 aa34.7■■■■□ 3.15
TRAPPC10-202ENST00000380221 SUCLG2Q96I99 432 aa34.7■■■■□ 3.15
TRAPPC10-202ENST00000380221 RPAP2Q8IXW5 612 aaPredicted RBP34.69■■■■□ 3.14
TRAPPC10-202ENST00000380221 ANKRD44Q8N8A2 993 aa34.69■■■■□ 3.14
TRAPPC10-202ENST00000380221 TBC1D9BQ66K14 1250 aa34.68■■■■□ 3.14
TRAPPC10-202ENST00000380221 KAZALD1Q96I82 304 aa34.68■■■■□ 3.14
TRAPPC10-202ENST00000380221 RWDD1Q9H446 243 aaPredicted RBP34.68■■■■□ 3.14
TRAPPC10-202ENST00000380221 HDAC1Q13547 482 aaPredicted RBP34.67■■■■□ 3.14
TRAPPC10-202ENST00000380221 FAM89AQ96GI7 184 aa34.67■■■■□ 3.14
TRAPPC10-202ENST00000380221 HDAC5Q9UQL6 1122 aa34.67■■■■□ 3.14
TRAPPC10-202ENST00000380221 SLC15A2Q16348 729 aa34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 SUSD4Q5VX71 490 aa34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 BICDL1Q6ZP65 573 aa34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 COL23A1Q86Y22 540 aaPredicted RBP34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 ZBTB38Q8NAP3 1195 aaPredicted RBP34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 UPF1Q92900 1129 aaKnown RBP eCLIP34.66■■■■□ 3.14
TRAPPC10-202ENST00000380221 FAM177BA6PVY3 158 aa34.65■■■■□ 3.14
TRAPPC10-202ENST00000380221 PCCAP05165 728 aaPredicted RBP34.65■■■■□ 3.14
TRAPPC10-202ENST00000380221 PARP10Q53GL7 1025 aa34.65■■■■□ 3.14
TRAPPC10-202ENST00000380221 STK32BQ9NY57 414 aa34.64■■■■□ 3.14
TRAPPC10-202ENST00000380221 TRMT112Q9UI30 125 aaKnown RBP34.64■■■■□ 3.14
TRAPPC10-202ENST00000380221 BICC1Q9H694 974 aaKnown RBP34.64■■■■□ 3.14
TRAPPC10-202ENST00000380221 PNPLA7Q6ZV29 1317 aa34.64■■■■□ 3.14
TRAPPC10-202ENST00000380221 GYS1P13807 737 aa34.63■■■■□ 3.13
TRAPPC10-202ENST00000380221 ATP8B2P98198 1209 aa34.63■■■■□ 3.13
TRAPPC10-202ENST00000380221 SYNE4Q8N205 404 aa34.63■■■■□ 3.13
TRAPPC10-202ENST00000380221 PNMA6EA0A0J9YXQ4 647 aa34.62■■■■□ 3.13
TRAPPC10-202ENST00000380221 MSH5O43196 834 aa34.62■■■■□ 3.13
TRAPPC10-202ENST00000380221 EPHA10Q5JZY3 1008 aa34.62■■■■□ 3.13
TRAPPC10-202ENST00000380221 FLAD1Q8NFF5 587 aa34.62■■■■□ 3.13
TRAPPC10-202ENST00000380221 UTP14AQ9BVJ6 771 aaKnown RBP34.61■■■■□ 3.13
TRAPPC10-202ENST00000380221 PPP1R42Q7Z4L9 355 aa34.6■■■■□ 3.13
TRAPPC10-202ENST00000380221 SETDB2Q96T68 719 aa34.6■■■■□ 3.13
TRAPPC10-202ENST00000380221 NTSR2O95665 410 aa34.58■■■■□ 3.13
TRAPPC10-202ENST00000380221 CDHR2Q9BYE9 1310 aa34.57■■■■□ 3.12
TRAPPC10-202ENST00000380221 SRGAP3O43295 1099 aa34.57■■■■□ 3.12
TRAPPC10-202ENST00000380221 HMMRO75330 724 aa34.57■■■■□ 3.12
TRAPPC10-202ENST00000380221 FOXO4P98177 505 aa34.57■■■■□ 3.12
TRAPPC10-202ENST00000380221 MTX1Q13505 466 aa34.56■■■■□ 3.12
TRAPPC10-202ENST00000380221 NFIXQ14938 502 aa34.56■■■■□ 3.12
TRAPPC10-202ENST00000380221 SH3TC1Q8TE82 1336 aa34.55■■■■□ 3.12
TRAPPC10-202ENST00000380221 COL24A1Q17RW2 1714 aa34.55■■■■□ 3.12
TRAPPC10-202ENST00000380221 NUTM1Q86Y26 1132 aa34.55■■■■□ 3.12
TRAPPC10-202ENST00000380221 IRS4O14654 1257 aaPredicted RBP34.54■■■■□ 3.12
TRAPPC10-202ENST00000380221 SSH3Q8TE77 659 aa34.54■■■■□ 3.12
TRAPPC10-202ENST00000380221 QSER1Q2KHR3 1735 aa34.54■■■■□ 3.12
TRAPPC10-202ENST00000380221 RABL6Q3YEC7 729 aaPredicted RBP34.54■■■■□ 3.12
TRAPPC10-202ENST00000380221 POLA2Q14181 598 aa34.52■■■■□ 3.12
TRAPPC10-202ENST00000380221 LMBR1LQ6UX01 489 aa34.52■■■■□ 3.12
TRAPPC10-202ENST00000380221 ILDR2Q71H61 639 aa34.52■■■■□ 3.12
TRAPPC10-202ENST00000380221 PLA2G12BQ9BX93 195 aa34.52■■■■□ 3.12
TRAPPC10-202ENST00000380221 NBPF5PQ86XG9 351 aaPredicted RBP34.51■■■■□ 3.11
TRAPPC10-202ENST00000380221 CARMIL3Q8ND23 1372 aa34.5■■■■□ 3.11
TRAPPC10-202ENST00000380221 TM4SF1P30408 202 aa34.5■■■■□ 3.11
TRAPPC10-202ENST00000380221 SMC5Q8IY18 1101 aa34.5■■■■□ 3.11
TRAPPC10-202ENST00000380221 DCTPP1Q9H773 170 aa34.5■■■■□ 3.11
TRAPPC10-202ENST00000380221 HCLS1P14317 486 aaPredicted RBP34.49■■■■□ 3.11
TRAPPC10-202ENST00000380221 ERFEQ4G0M1 354 aa34.49■■■■□ 3.11
TRAPPC10-202ENST00000380221 NYXQ9GZU5 481 aa34.49■■■■□ 3.11
TRAPPC10-202ENST00000380221 TSHZ2Q9NRE2 1034 aa34.49■■■■□ 3.11
TRAPPC10-202ENST00000380221 SKAP1Q86WV1 359 aa34.48■■■■□ 3.11
TRAPPC10-202ENST00000380221 GCC1Q96CN9 775 aa34.48■■■■□ 3.11
TRAPPC10-202ENST00000380221 CHMP3Q9Y3E7 222 aa34.48■■■■□ 3.11
TRAPPC10-202ENST00000380221 DDX60Q8IY21 1712 aaKnown RBP34.48■■■■□ 3.11
TRAPPC10-202ENST00000380221 PDE8AO60658 829 aa34.47■■■■□ 3.11
TRAPPC10-202ENST00000380221 GTF2E1P29083 439 aaPredicted RBP34.47■■■■□ 3.11
TRAPPC10-202ENST00000380221 TPTE2Q6XPS3 522 aa34.47■■■■□ 3.11
TRAPPC10-202ENST00000380221 NLGN1Q8N2Q7 840 aa34.47■■■■□ 3.11
TRAPPC10-202ENST00000380221 PDGFDQ9GZP0 370 aaPredicted RBP34.46■■■■□ 3.11
TRAPPC10-202ENST00000380221 MYH3P11055 1940 aa34.45■■■■□ 3.11
TRAPPC10-202ENST00000380221 CCDC85AQ96PX6 553 aaPredicted RBP34.45■■■■□ 3.11
TRAPPC10-202ENST00000380221 CSF1RP07333 972 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 CTSWP56202 376 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 MSL1Q68DK7 614 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 EXOC6BQ9Y2D4 811 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 LAMB2P55268 1798 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 DDR1Q08345 913 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 CCDC24Q8N4L8 307 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 TTLL11Q8NHH1 800 aa34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 PA2G4Q9UQ80 394 aaKnown RBP34.44■■■■□ 3.1
TRAPPC10-202ENST00000380221 ABCC12Q96J65 1359 aa34.43■■■■□ 3.1
TRAPPC10-202ENST00000380221 SERPINB2P05120 415 aa34.42■■■■□ 3.1
TRAPPC10-202ENST00000380221 KLHDC4Q8TBB5 520 aa34.42■■■■□ 3.1
TRAPPC10-202ENST00000380221 POLRMTO00411 1230 aaKnown RBP34.41■■■■□ 3.1
TRAPPC10-202ENST00000380221 NPHP1O15259 732 aa34.41■■■■□ 3.1
TRAPPC10-202ENST00000380221 SURF6O75683 361 aaKnown RBP34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms