RNA–Protein interactions for RNA: ENST00000380010.8

SLC19A1-202, Transcript of solute carrier family 19 member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC19A1, Length 1,884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-202ENST00000380010 SYNE4Q8N205 404 aa28.74■■■□□ 2.19
SLC19A1-202ENST00000380010 ANKRD36CQ5JPF3 1778 aa28.74■■■□□ 2.19
SLC19A1-202ENST00000380010 C16orf71Q8IYS4 520 aaPredicted RBP28.74■■■□□ 2.19
SLC19A1-202ENST00000380010 PROM2Q8N271 834 aa28.74■■■□□ 2.19
SLC19A1-202ENST00000380010 FAM89AQ96GI7 184 aa28.74■■■□□ 2.19
SLC19A1-202ENST00000380010 C4BP0C0L5 1744 aa28.73■■■□□ 2.19
SLC19A1-202ENST00000380010 ZNF34Q8IZ26 560 aa28.73■■■□□ 2.19
SLC19A1-202ENST00000380010 PA2G4Q9UQ80 394 aaKnown RBP28.73■■■□□ 2.19
SLC19A1-202ENST00000380010 FOXO4P98177 505 aa28.72■■■□□ 2.19
SLC19A1-202ENST00000380010 SURF6O75683 361 aaKnown RBP28.72■■■□□ 2.19
SLC19A1-202ENST00000380010 RABL6Q3YEC7 729 aaPredicted RBP28.7■■■□□ 2.19
SLC19A1-202ENST00000380010 OTUD7AQ8TE49 926 aaPredicted RBP28.7■■■□□ 2.19
SLC19A1-202ENST00000380010 SRP68Q9UHB9 627 aaKnown RBP28.7■■■□□ 2.19
SLC19A1-202ENST00000380010 APBA3O96018 575 aa28.7■■■□□ 2.18
SLC19A1-202ENST00000380010 PCCAP05165 728 aaPredicted RBP28.7■■■□□ 2.18
SLC19A1-202ENST00000380010 KLHDC4Q8TBB5 520 aa28.7■■■□□ 2.18
SLC19A1-202ENST00000380010 RTCBQ9Y3I0 505 aaKnown RBP28.7■■■□□ 2.18
SLC19A1-202ENST00000380010 TXNRD1Q16881 649 aa28.69■■■□□ 2.18
SLC19A1-202ENST00000380010 ZBTB38Q8NAP3 1195 aaPredicted RBP28.69■■■□□ 2.18
SLC19A1-202ENST00000380010 BCORQ6W2J9 1755 aa28.69■■■□□ 2.18
SLC19A1-202ENST00000380010 PHF14O94880 888 aa28.68■■■□□ 2.18
SLC19A1-202ENST00000380010 SLC27A3Q5K4L6 730 aa28.68■■■□□ 2.18
SLC19A1-202ENST00000380010 LMBR1LQ6UX01 489 aa28.68■■■□□ 2.18
SLC19A1-202ENST00000380010 AK7Q96M32 723 aa28.68■■■□□ 2.18
SLC19A1-202ENST00000380010 BCL2L12Q9HB09 334 aa28.68■■■□□ 2.18
SLC19A1-202ENST00000380010 FAM177BA6PVY3 158 aa28.67■■■□□ 2.18
SLC19A1-202ENST00000380010 SUSD4Q5VX71 490 aa28.67■■■□□ 2.18
SLC19A1-202ENST00000380010 ARHGEF1Q92888 912 aaKnown RBP28.67■■■□□ 2.18
SLC19A1-202ENST00000380010 TRMT112Q9UI30 125 aaKnown RBP28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 RFX5P48382 616 aaPredicted RBP28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 USPL1Q5W0Q7 1092 aa28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 LRRCC1Q9C099 1032 aa28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 NIP7Q9Y221 180 aaKnown RBP eCLIP28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 NOP58Q9Y2X3 529 aaKnown RBP28.66■■■□□ 2.18
SLC19A1-202ENST00000380010 IL1RAPL2Q9NP60 686 aa28.64■■■□□ 2.18
SLC19A1-202ENST00000380010 ZBTB47Q9UFB7 747 aaPredicted RBP28.64■■■□□ 2.18
SLC19A1-202ENST00000380010 NARFQ9UHQ1 456 aa28.64■■■□□ 2.18
SLC19A1-202ENST00000380010 CHMP3Q9Y3E7 222 aa28.64■■■□□ 2.18
SLC19A1-202ENST00000380010 SCN7AQ01118 1682 aa28.63■■■□□ 2.17
SLC19A1-202ENST00000380010 PLSCR1O15162 318 aa28.63■■■□□ 2.17
SLC19A1-202ENST00000380010 PLEKHM2Q8IWE5 1019 aa28.63■■■□□ 2.17
SLC19A1-202ENST00000380010 SIL1Q9H173 461 aa28.63■■■□□ 2.17
SLC19A1-202ENST00000380010 TNS1Q9HBL0 1735 aaKnown RBP28.62■■■□□ 2.17
SLC19A1-202ENST00000380010 RHPN1Q8TCX5 695 aa28.62■■■□□ 2.17
SLC19A1-202ENST00000380010 ZNF652Q9Y2D9 606 aa28.62■■■□□ 2.17
SLC19A1-202ENST00000380010 CCDC85AQ96PX6 553 aaPredicted RBP28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 CDHR2Q9BYE9 1310 aa28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 RAB11FIP3O75154 756 aa28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 PTPN12Q05209 780 aaKnown RBP28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 OS9Q13438 667 aaPredicted RBP28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 TBC1D9BQ66K14 1250 aa28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 CLEC4GQ6UXB4 293 aa28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 BICDL1Q6ZP65 573 aa28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.61■■■□□ 2.17
SLC19A1-202ENST00000380010 C4AP0C0L4 1744 aa28.6■■■□□ 2.17
SLC19A1-202ENST00000380010 IRS4O14654 1257 aaPredicted RBP28.6■■■□□ 2.17
SLC19A1-202ENST00000380010 TRAPPC3LQ5T215 181 aa28.6■■■□□ 2.17
SLC19A1-202ENST00000380010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 C8orf34Q49A92 452 aa28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 PLA2G12BQ9BX93 195 aa28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 ZPR1O75312 459 aa28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 PARP10Q53GL7 1025 aa28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 UTP14AQ9BVJ6 771 aaKnown RBP28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 UBR3Q6ZT12 1888 aa28.59■■■□□ 2.17
SLC19A1-202ENST00000380010 NTSR2O95665 410 aa28.58■■■□□ 2.17
SLC19A1-202ENST00000380010 BACH2Q9BYV9 841 aa28.58■■■□□ 2.17
SLC19A1-202ENST00000380010 USP42Q9H9J4 1324 aaKnown RBP28.58■■■□□ 2.16
SLC19A1-202ENST00000380010 SASH1O94885 1247 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 RFC4P35249 363 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 ILDR1Q86SU0 546 aaPredicted RBP28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 NUTM1Q86Y26 1132 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 KIF1BPQ96EK5 621 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 COPRSQ9NQ92 184 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 HCLS1P14317 486 aaPredicted RBP28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 FAM161AQ3B820 660 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 HSP90AB4PQ58FF6 505 aa28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 ZNF594Q96JF6 807 aaPredicted RBP28.57■■■□□ 2.16
SLC19A1-202ENST00000380010 ZNF827Q17R98 1081 aa28.56■■■□□ 2.16
SLC19A1-202ENST00000380010 TSHZ3Q63HK5 1081 aa28.56■■■□□ 2.16
SLC19A1-202ENST00000380010 SH3TC1Q8TE82 1336 aa28.56■■■□□ 2.16
SLC19A1-202ENST00000380010 SALL3Q9BXA9 1300 aa28.56■■■□□ 2.16
SLC19A1-202ENST00000380010 CSF1RP07333 972 aa28.55■■■□□ 2.16
SLC19A1-202ENST00000380010 G3BP1Q13283 466 aaKnown RBP eCLIP28.55■■■□□ 2.16
SLC19A1-202ENST00000380010 CTSWP56202 376 aa28.53■■■□□ 2.16
SLC19A1-202ENST00000380010 TTLL11Q8NHH1 800 aa28.53■■■□□ 2.16
SLC19A1-202ENST00000380010 PDE8AO60658 829 aa28.53■■■□□ 2.16
SLC19A1-202ENST00000380010 GSPT1P15170 499 aaKnown RBP28.53■■■□□ 2.16
SLC19A1-202ENST00000380010 RGL2O15211 777 aa28.52■■■□□ 2.16
SLC19A1-202ENST00000380010 GREM2Q9H772 168 aa28.52■■■□□ 2.16
SLC19A1-202ENST00000380010 ADRA2BP18089 450 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 PDE1AP54750 535 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 SSFA2P28290 1259 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 ERFEQ4G0M1 354 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 ERC1Q8IUD2 1116 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 AKT1S1Q96B36 256 aa28.51■■■□□ 2.15
SLC19A1-202ENST00000380010 EN1Q05925 392 aaPredicted RBP28.5■■■□□ 2.15
SLC19A1-202ENST00000380010 LRRC24Q50LG9 513 aa28.49■■■□□ 2.15
SLC19A1-202ENST00000380010 SETDB2Q96T68 719 aa28.49■■■□□ 2.15
SLC19A1-202ENST00000380010 PUS3Q9BZE2 481 aaKnown RBP28.49■■■□□ 2.15
SLC19A1-202ENST00000380010 RBM19Q9Y4C8 960 aaKnown RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms