RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 PNPLA7Q6ZV29 1317 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 CLEC4GQ6UXB4 293 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 PDGFDQ9GZP0 370 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 GNAI3P08754 354 aa17.73■□□□□ 0.43
HERPUD1-203ENST00000379792 CHMP4BQ9H444 224 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-203ENST00000379792 PPP4R2Q9NY27 417 aa17.73■□□□□ 0.43
HERPUD1-203ENST00000379792 GYS1P13807 737 aa17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 NUP98P52948 1817 aa17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
HERPUD1-203ENST00000379792 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 FLAD1Q8NFF5 587 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 FAM89AQ96GI7 184 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 MTFR1LQ9H019 292 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 N4BP2Q86UW6 1770 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 H7C1W4 665 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 GNAI2P04899 355 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 SLC16A10Q8TF71 515 aa17.71■□□□□ 0.43
HERPUD1-203ENST00000379792 UTYO14607 1347 aa17.7■□□□□ 0.42
HERPUD1-203ENST00000379792 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
HERPUD1-203ENST00000379792 SUCLG2Q96I99 432 aa17.7■□□□□ 0.42
HERPUD1-203ENST00000379792 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
HERPUD1-203ENST00000379792 BCORQ6W2J9 1755 aa17.7■□□□□ 0.42
HERPUD1-203ENST00000379792 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 SCN7AQ01118 1682 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 CASP7P55210 303 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 AAMPQ13685 434 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
HERPUD1-203ENST00000379792 RGL2O15211 777 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 NFIXQ14938 502 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
HERPUD1-203ENST00000379792 PTGER2P43116 358 aa17.67■□□□□ 0.42
HERPUD1-203ENST00000379792 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
HERPUD1-203ENST00000379792 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
HERPUD1-203ENST00000379792 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
HERPUD1-203ENST00000379792 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 NTSR2O95665 410 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 IGHDP01880 384 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
HERPUD1-203ENST00000379792 TM4SF1P30408 202 aa17.65■□□□□ 0.42
HERPUD1-203ENST00000379792 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
HERPUD1-203ENST00000379792 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
HERPUD1-203ENST00000379792 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 PNMA6EA0A0J9YXQ4 647 aa17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 ERFEQ4G0M1 354 aa17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
HERPUD1-203ENST00000379792 FOXO4P98177 505 aa17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 DDR1Q08345 913 aa17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
HERPUD1-203ENST00000379792 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
HERPUD1-203ENST00000379792 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
HERPUD1-203ENST00000379792 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
HERPUD1-203ENST00000379792 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
HERPUD1-203ENST00000379792 NPHP1O15259 732 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 SERPINB2P05120 415 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 CHMP3Q9Y3E7 222 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 MMP10P09238 476 aa17.61■□□□□ 0.41
HERPUD1-203ENST00000379792 POLD1P28340 1107 aa17.6■□□□□ 0.41
HERPUD1-203ENST00000379792 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
HERPUD1-203ENST00000379792 PDE8AO60658 829 aa17.59■□□□□ 0.41
HERPUD1-203ENST00000379792 RABL6Q3YEC7 729 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-203ENST00000379792 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
HERPUD1-203ENST00000379792 PLA2G12BQ9BX93 195 aa17.59■□□□□ 0.41
HERPUD1-203ENST00000379792 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
HERPUD1-203ENST00000379792 CTSWP56202 376 aa17.58■□□□□ 0.41
HERPUD1-203ENST00000379792 MTX1Q13505 466 aa17.58■□□□□ 0.41
HERPUD1-203ENST00000379792 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.41
HERPUD1-203ENST00000379792 C3orf67Q6ZVT6 689 aa17.58■□□□□ 0.41
HERPUD1-203ENST00000379792 HMMRO75330 724 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms