RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 KCNQ4P56696 695 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 IL1RAPL2Q9NP60 686 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 TTC22Q5TAA0 569 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 SALL3Q9BXA9 1300 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 SEC24BO95487 1268 aa21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 FOXO4P98177 505 aa21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 GPTP24298 496 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 OSBPL3Q9H4L5 887 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 PDE1AP54750 535 aa21.63■■□□□ 1.05
LYSMD4-203ENST00000378904 TAF1LQ8IZX4 1826 aa21.63■■□□□ 1.05
LYSMD4-203ENST00000378904 PCCAP05165 728 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 RBM6P78332 1123 aaKnown RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 LMBR1LQ6UX01 489 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 NLRP10Q86W26 655 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 CNTNAP4Q9C0A0 1308 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 RFX5P48382 616 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 ERC1Q8IUD2 1116 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 KLHDC4Q8TBB5 520 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 BCORQ6W2J9 1755 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 MX1P20591 662 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 NBR1Q14596 966 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 ZBTB38Q8NAP3 1195 aaPredicted RBP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 TUBGCP6Q96RT7 1819 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 ZNF34Q8IZ26 560 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 FAM89AQ96GI7 184 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 SIL1Q9H173 461 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 COPRSQ9NQ92 184 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 NUTM1Q86Y26 1132 aa21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 CHMP3Q9Y3E7 222 aa21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 SASH1O94885 1247 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 TSHZ3Q63HK5 1081 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 STAP2Q9UGK3 403 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 UBN2Q6ZU65 1347 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 CLASRPQ8N2M8 674 aaKnown RBP21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 CDHR2Q9BYE9 1310 aa21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 MYH3P11055 1940 aa21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
LYSMD4-203ENST00000378904 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
LYSMD4-203ENST00000378904 AOX1Q06278 1338 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 SDSP20132 328 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 SYNE4Q8N205 404 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 C4BP0C0L5 1744 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 CDC45O75419 566 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TBC1D9Q6ZT07 1266 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 SCN7AQ01118 1682 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TRIM37O94972 964 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 ZNF652Q9Y2D9 606 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 GNPATO15228 680 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 SUSD4Q5VX71 490 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 IRS4O14654 1257 aaPredicted RBP21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 MFAP1P55081 439 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 SMIM5Q71RC9 77 aa21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 CSF1RP07333 972 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 IFIT2P09913 472 aaKnown RBP21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 RXRBP28702 533 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 PARP10Q53GL7 1025 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 AACSQ86V21 672 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 USP42Q9H9J4 1324 aaKnown RBP21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 EAF2Q96CJ1 260 aaPredicted RBP21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 EP400Q96L91 3159 aa21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 PI4K2BQ8TCG2 481 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 LRRC4BQ9NT99 713 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 ZNF594Q96JF6 807 aaPredicted RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 FAM177BA6PVY3 158 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC85AQ96PX6 553 aaPredicted RBP21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 PDE8AO60658 829 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 CTSWP56202 376 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 TFCP2Q12800 502 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 TTLL11Q8NHH1 800 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 RGL2O15211 777 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC8Q9H0W5 538 aaPredicted RBP21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 LAMB2P55268 1798 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms