RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 KCNQ4P56696 695 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 IL1RAPL2Q9NP60 686 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 TTC22Q5TAA0 569 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 SALL3Q9BXA9 1300 aa21.65■■□□□ 1.06
LYSMD4-203ENST00000378904 SEC24BO95487 1268 aa21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 FOXO4P98177 505 aa21.64■■□□□ 1.06
LYSMD4-203ENST00000378904 GPTP24298 496 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 KRT27Q7Z3Y8 459 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 OSBPL3Q9H4L5 887 aa21.64■■□□□ 1.05
LYSMD4-203ENST00000378904 PDE1AP54750 535 aa21.63■■□□□ 1.05
LYSMD4-203ENST00000378904 TAF1LQ8IZX4 1826 aa21.63■■□□□ 1.05
LYSMD4-203ENST00000378904 PCCAP05165 728 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 RBM6P78332 1123 aaKnown RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 LMBR1LQ6UX01 489 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 NLRP10Q86W26 655 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 CNTNAP4Q9C0A0 1308 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 RFX5P48382 616 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 ERC1Q8IUD2 1116 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 KLHDC4Q8TBB5 520 aa21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
LYSMD4-203ENST00000378904 BCORQ6W2J9 1755 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 MX1P20591 662 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 NBR1Q14596 966 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 ZBTB38Q8NAP3 1195 aaPredicted RBP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 CAMTA2O94983 1202 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
LYSMD4-203ENST00000378904 TUBGCP6Q96RT7 1819 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 ZNF34Q8IZ26 560 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 FAM89AQ96GI7 184 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 SIL1Q9H173 461 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 COPRSQ9NQ92 184 aa21.6■■□□□ 1.05
LYSMD4-203ENST00000378904 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 NUTM1Q86Y26 1132 aa21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 CHMP3Q9Y3E7 222 aa21.59■■□□□ 1.05
LYSMD4-203ENST00000378904 SASH1O94885 1247 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 TSHZ3Q63HK5 1081 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 STAP2Q9UGK3 403 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 UBN2Q6ZU65 1347 aa21.58■■□□□ 1.05
LYSMD4-203ENST00000378904 CLASRPQ8N2M8 674 aaKnown RBP21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 CDHR2Q9BYE9 1310 aa21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 MYH3P11055 1940 aa21.58■■□□□ 1.04
LYSMD4-203ENST00000378904 PLA2G12BQ9BX93 195 aa21.57■■□□□ 1.04
LYSMD4-203ENST00000378904 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
LYSMD4-203ENST00000378904 AOX1Q06278 1338 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 SDSP20132 328 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 SYNE4Q8N205 404 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 C4BP0C0L5 1744 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 CDC45O75419 566 aa21.55■■□□□ 1.04
LYSMD4-203ENST00000378904 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TBC1D9Q6ZT07 1266 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 SCN7AQ01118 1682 aa21.54■■□□□ 1.04
LYSMD4-203ENST00000378904 TRIM37O94972 964 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 ZNF652Q9Y2D9 606 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 GNPATO15228 680 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 SUSD4Q5VX71 490 aa21.53■■□□□ 1.04
LYSMD4-203ENST00000378904 IRS4O14654 1257 aaPredicted RBP21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 MFAP1P55081 439 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 SMIM5Q71RC9 77 aa21.52■■□□□ 1.04
LYSMD4-203ENST00000378904 CSF1RP07333 972 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 IFIT2P09913 472 aaKnown RBP21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 RXRBP28702 533 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 PARP10Q53GL7 1025 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 CLEC4GQ6UXB4 293 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 AACSQ86V21 672 aa21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 NIP7Q9Y221 180 aaKnown RBP eCLIP21.52■■□□□ 1.03
LYSMD4-203ENST00000378904 USP42Q9H9J4 1324 aaKnown RBP21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 EAF2Q96CJ1 260 aaPredicted RBP21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 EP400Q96L91 3159 aa21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
LYSMD4-203ENST00000378904 PI4K2BQ8TCG2 481 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 LRRC4BQ9NT99 713 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC57Q2TAC2 916 aa21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 ZNF594Q96JF6 807 aaPredicted RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-203ENST00000378904 FAM177BA6PVY3 158 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC85AQ96PX6 553 aaPredicted RBP21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 DDX60Q8IY21 1712 aaKnown RBP21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 PDE8AO60658 829 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 CTSWP56202 376 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 TFCP2Q12800 502 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 TTLL11Q8NHH1 800 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
LYSMD4-203ENST00000378904 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 RGL2O15211 777 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 CCDC8Q9H0W5 538 aaPredicted RBP21.48■■□□□ 1.03
LYSMD4-203ENST00000378904 LAMB2P55268 1798 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms