RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 GOLGA8BA8MQT2 603 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 VCXQ9H320 206 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 KRT86O43790 486 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 TBC1D5Q92609 795 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
ITM2B-202ENST00000378565 CASQ2O14958 399 aaPredicted RBP12.99□□□□□ -0.33
ITM2B-202ENST00000378565 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
ITM2B-202ENST00000378565 VGLL3A8MV65 326 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 GJB2P29033 226 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 CCDC40Q4G0X9 1142 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
ITM2B-202ENST00000378565 TBC1D32Q96NH3 1257 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 GDPD2Q9HCC8 539 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 CCDC102BQ68D86 513 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 JAKMIP2Q96AA8 810 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 RFC1P35251 1148 aaPredicted RBP12.98□□□□□ -0.33
ITM2B-202ENST00000378565 MPHOSPH10O00566 681 aaKnown RBP12.98□□□□□ -0.33
ITM2B-202ENST00000378565 PANK2Q9BZ23 570 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 RMND1Q9NWS8 449 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 CEP128Q6ZU80 1094 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 INTS8Q75QN2 995 aaKnown RBP12.98□□□□□ -0.33
ITM2B-202ENST00000378565 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 SLC12A7Q9Y666 1083 aa12.98□□□□□ -0.33
ITM2B-202ENST00000378565 PABPN1LA6NDY0 278 aaKnown RBP12.97□□□□□ -0.33
ITM2B-202ENST00000378565 GIMAP6Q6P9H5 292 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 PRC1O43663 620 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 USH1CQ9Y6N9 552 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 PPP1R12CQ9BZL4 782 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 FERMT2Q96AC1 680 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 SSRP1Q08945 709 aaKnown RBP12.97□□□□□ -0.33
ITM2B-202ENST00000378565 TSGA10Q9BZW7 698 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 ATP5DP30049 168 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
ITM2B-202ENST00000378565 KRT13P13646 458 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 CALML4Q96GE6 196 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 USP5P45974 858 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.333e-18■■□□□ 11.7
ITM2B-202ENST00000378565 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 KRT83P78385 493 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 CCDC38Q502W7 563 aa12.96□□□□□ -0.33
ITM2B-202ENST00000378565 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.34
ITM2B-202ENST00000378565 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.34
ITM2B-202ENST00000378565 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.34
ITM2B-202ENST00000378565 NDUFAB1O14561 156 aa12.96□□□□□ -0.34
ITM2B-202ENST00000378565 SYKP43405 635 aa12.96□□□□□ -0.34
ITM2B-202ENST00000378565 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.34
ITM2B-202ENST00000378565 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.34
ITM2B-202ENST00000378565 SEC62Q99442 399 aaKnown RBP12.96□□□□□ -0.34
ITM2B-202ENST00000378565 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 IGSF3O75054 1194 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC186Q7Z3E2 898 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 LRRC45Q96CN5 670 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 TRIM47Q96LD4 638 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 MRVI1Q9Y6F6 885 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 LRP2BPQ9P2M1 347 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 NEDD9Q14511 834 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 EXOC1Q9NV70 894 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 ERBINQ96RT1 1412 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
ITM2B-202ENST00000378565 STXBP4Q6ZWJ1 553 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 EXOC6BQ9Y2D4 811 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
ITM2B-202ENST00000378565 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 IL1RAPL2Q9NP60 686 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 SPAG1Q07617 926 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 AP1ARQ63HQ0 302 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 CAPZA3Q96KX2 299 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
ITM2B-202ENST00000378565 MYO10Q9HD67 2058 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 GMNNO75496 209 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
ITM2B-202ENST00000378565 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 NUF2Q9BZD4 464 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
ITM2B-202ENST00000378565 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms