RNA–Protein interactions for RNA: ENST00000378247.7

SPIRE2-201, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPIRE2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-201ENST00000378247 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
SPIRE2-201ENST00000378247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
SPIRE2-201ENST00000378247 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
SPIRE2-201ENST00000378247 IFIT2P09913 472 aaKnown RBP22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 KLHDC4Q8TBB5 520 aa22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 ZKSCAN1P17029 563 aaPredicted RBP22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 AACSQ86V21 672 aa22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 VGLL3A8MV65 326 aa22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 SSH3Q8TE77 659 aa22.36■■□□□ 1.17
SPIRE2-201ENST00000378247 GTPBP4Q9BZE4 634 aaKnown RBP22.35■■□□□ 1.17
SPIRE2-201ENST00000378247 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
SPIRE2-201ENST00000378247 CLASRPQ8N2M8 674 aaKnown RBP22.35■■□□□ 1.17
SPIRE2-201ENST00000378247 AIMP1Q12904 312 aaKnown RBP22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 HSP90B1P14625 803 aaKnown RBP22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 GUCY1B3Q02153 619 aa22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 ANKRD7Q92527 254 aa22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
SPIRE2-201ENST00000378247 CWF19L2Q2TBE0 894 aaKnown RBP22.33■■□□□ 1.17
SPIRE2-201ENST00000378247 C9orf78Q9NZ63 289 aaPredicted RBP22.33■■□□□ 1.17
SPIRE2-201ENST00000378247 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
SPIRE2-201ENST00000378247 CREB3L3Q68CJ9 461 aa22.33■■□□□ 1.17
SPIRE2-201ENST00000378247 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
SPIRE2-201ENST00000378247 ZNF75DP51815 510 aa22.33■■□□□ 1.16
SPIRE2-201ENST00000378247 NMIQ13287 307 aaPredicted RBP22.33■■□□□ 1.16
SPIRE2-201ENST00000378247 NLRP6P59044 892 aa22.32■■□□□ 1.16
SPIRE2-201ENST00000378247 FGD1P98174 961 aa22.32■■□□□ 1.16
SPIRE2-201ENST00000378247 ZNF215Q9UL58 517 aaPredicted RBP22.32■■□□□ 1.16
SPIRE2-201ENST00000378247 KCNA6P17658 529 aa22.32■■□□□ 1.16
SPIRE2-201ENST00000378247 BBXQ8WY36 941 aaPredicted RBP22.32■■□□□ 1.16
SPIRE2-201ENST00000378247 GOLGA6L19H0YKK7 550 aa22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 GORABQ5T7V8 394 aa22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 TLR7Q9NYK1 1049 aaKnown RBP22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 RIMS1Q86UR5 1692 aaKnown RBP22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 CEP135Q66GS9 1140 aa22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
SPIRE2-201ENST00000378247 H3BQV1 296 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 IFFO2Q5TF58 517 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 FSD1Q9BTV5 496 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 LGR6Q9HBX8 967 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 VPS53Q5VIR6 699 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 PGBD1Q96JS3 809 aa22.3■■□□□ 1.16
SPIRE2-201ENST00000378247 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 BLOC1S2Q6QNY1 142 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 LEO1Q8WVC0 666 aaPredicted RBP22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 RUFY2Q8WXA3 655 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 CTNNA3Q9UI47 895 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 SSH2Q76I76 1423 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 ELF2Q15723 593 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 C11orf57Q6ZUT1 292 aaPredicted RBP22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 BECN2A8MW95 431 aa22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 CTIFO43310 598 aaKnown RBP22.29■■□□□ 1.16
SPIRE2-201ENST00000378247 ZSWIM6Q9HCJ5 1215 aa22.28■■□□□ 1.16
SPIRE2-201ENST00000378247 TECPR2O15040 1411 aa22.28■■□□□ 1.16
SPIRE2-201ENST00000378247 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
SPIRE2-201ENST00000378247 PTPN21Q16825 1174 aa22.28■■□□□ 1.16
SPIRE2-201ENST00000378247 KIF20AO95235 890 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 SKILP12757 684 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 ISM2Q6H9L7 571 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 ECHDC1Q9NTX5 307 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 CCDC171Q6TFL3 1326 aa22.27■■□□□ 1.16
SPIRE2-201ENST00000378247 SMTNL1A8MU46 457 aa22.27■■□□□ 1.15
SPIRE2-201ENST00000378247 DNAAF4Q8WXU2 420 aa22.27■■□□□ 1.15
SPIRE2-201ENST00000378247 OGFRQ9NZT2 677 aa22.27■■□□□ 1.15
SPIRE2-201ENST00000378247 SETD1AO15047 1707 aaKnown RBP22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 PRAMEF22A3QJZ6 481 aa22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 SLC27A2O14975 620 aa22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 TPM3P06753 285 aa22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 BRF1Q92994 677 aa22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 ZNF589Q86UQ0 364 aaPredicted RBP22.26■■□□□ 1.15
SPIRE2-201ENST00000378247 SLFNL1Q499Z3 407 aa22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 SH2B1Q9NRF2 756 aaPredicted RBP22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 PTPN14Q15678 1187 aa22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 ZSCAN31Q96LW9 406 aaPredicted RBP22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 KMT5BQ4FZB7 885 aa22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
SPIRE2-201ENST00000378247 SETD1BQ9UPS6 1966 aaKnown RBP22.24■■□□□ 1.15
SPIRE2-201ENST00000378247 CCT2P78371 535 aaKnown RBP22.24■■□□□ 1.15
SPIRE2-201ENST00000378247 NECTIN1Q15223 517 aa22.24■■□□□ 1.15
SPIRE2-201ENST00000378247 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
SPIRE2-201ENST00000378247 PROSER3Q2NL68 480 aa22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 GTF3C6Q969F1 213 aa22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 SEC62Q99442 399 aaKnown RBP22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 BIN1O00499 593 aa22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 CHST3Q7LGC8 479 aa22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 EAF2Q96CJ1 260 aaPredicted RBP22.23■■□□□ 1.15
SPIRE2-201ENST00000378247 CCDC69A6NI79 296 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 POLA2Q14181 598 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 TMX1Q9H3N1 280 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 ABTB2Q8N961 1025 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 LRRN4CLQ8ND94 238 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
SPIRE2-201ENST00000378247 PIP4K2AP48426 406 aaPredicted RBP22.21■■□□□ 1.15
SPIRE2-201ENST00000378247 LRRC8AQ8IWT6 810 aa22.21■■□□□ 1.15
SPIRE2-201ENST00000378247 CLSTN2Q9H4D0 955 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms