RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 DDX49Q9Y6V7 483 aaKnown RBP23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 GLI3P10071 1580 aa23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 ERVV-2B6SEH9 535 aa23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 CLEC17AQ6ZS10 378 aa23.26■■□□□ 1.31
PCDHA4-201ENST00000378125 ARFGEF2Q9Y6D5 1785 aa23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 NCLP19338 710 aaKnown RBP23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 RFX5P48382 616 aaPredicted RBP23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 SKOR2Q2VWA4 1001 aaPredicted RBP23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 RUFY2Q8WXA3 655 aa23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 LMBR1LQ6UX01 489 aa23.25■■□□□ 1.31
PCDHA4-201ENST00000378125 CUL4AQ13619 759 aa23.24■■□□□ 1.31
PCDHA4-201ENST00000378125 FSD1Q9BTV5 496 aa23.24■■□□□ 1.31
PCDHA4-201ENST00000378125 DTNBO60941 627 aa23.24■■□□□ 1.31
PCDHA4-201ENST00000378125 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
PCDHA4-201ENST00000378125 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
PCDHA4-201ENST00000378125 COPRSQ9NQ92 184 aa23.23■■□□□ 1.31
PCDHA4-201ENST00000378125 PLEKHG2Q9H7P9 1386 aa23.23■■□□□ 1.31
PCDHA4-201ENST00000378125 CASTP20810 708 aaKnown RBP23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 GAS2L3Q86XJ1 694 aa23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 PRPF40AO75400 957 aaKnown RBP23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 PTMSP20962 102 aa23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 CASP7P55210 303 aa23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 ADCK5Q3MIX3 580 aa23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 IL17RAQ96F46 866 aa23.22■■□□□ 1.31
PCDHA4-201ENST00000378125 EPB41L2O43491 1005 aaKnown RBP23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 AK2P54819 239 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 BTG4Q9NY30 223 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 DBNLQ9UJU6 430 aaKnown RBP23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 A0A0D9SFI3 127 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 LMBRD1Q9NUN5 540 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
PCDHA4-201ENST00000378125 KCNJ4P48050 445 aa23.2■■□□□ 1.3
PCDHA4-201ENST00000378125 RABL6Q3YEC7 729 aaPredicted RBP23.2■■□□□ 1.3
PCDHA4-201ENST00000378125 LAMB4A4D0S4 1761 aa23.2■■□□□ 1.3
PCDHA4-201ENST00000378125 ABCA3Q99758 1704 aa23.2■■□□□ 1.3
PCDHA4-201ENST00000378125 JAKMIP1Q96N16 626 aaKnown RBP23.2■■□□□ 1.3
PCDHA4-201ENST00000378125 KCPQ6ZWJ8 1503 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 CHGBP05060 677 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 CWC25Q9NXE8 425 aaPredicted RBP23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 TMOD3Q9NYL9 352 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 FOXO4P98177 505 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 TTC14Q96N46 770 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 GRPEL1Q9HAV7 217 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 ASAP1Q9ULH1 1129 aa23.19■■□□□ 1.3
PCDHA4-201ENST00000378125 CCDC171Q6TFL3 1326 aa23.18■■□□□ 1.3
PCDHA4-201ENST00000378125 RUFY3Q7L099 469 aa23.18■■□□□ 1.3
PCDHA4-201ENST00000378125 DNAJC2Q99543 621 aaKnown RBP23.18■■□□□ 1.3
PCDHA4-201ENST00000378125 RBM8AQ9Y5S9 174 aaKnown RBP23.18■■□□□ 1.3
PCDHA4-201ENST00000378125 H7C1W4 665 aa23.17■■□□□ 1.3
PCDHA4-201ENST00000378125 KLHL40Q2TBA0 621 aa23.17■■□□□ 1.3
PCDHA4-201ENST00000378125 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
PCDHA4-201ENST00000378125 ZNF594Q96JF6 807 aaPredicted RBP23.17■■□□□ 1.3
PCDHA4-201ENST00000378125 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
PCDHA4-201ENST00000378125 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
PCDHA4-201ENST00000378125 ERBB4Q15303 1308 aa23.16■■□□□ 1.3
PCDHA4-201ENST00000378125 BRD1O95696 1058 aa23.16■■□□□ 1.3
PCDHA4-201ENST00000378125 COL9A3Q14050 684 aaPredicted RBP23.16■■□□□ 1.3
PCDHA4-201ENST00000378125 LARGE1O95461 756 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 MRE11P49959 708 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 ZNF589Q86UQ0 364 aaPredicted RBP23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 NEUROD6Q96NK8 337 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 NECTIN1Q15223 517 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 PIGBQ92521 554 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 UBR2Q8IWV8 1755 aa23.15■■□□□ 1.3
PCDHA4-201ENST00000378125 CREB3L3Q68CJ9 461 aa23.14■■□□□ 1.3
PCDHA4-201ENST00000378125 DNAJC10Q8IXB1 793 aa23.14■■□□□ 1.3
PCDHA4-201ENST00000378125 CCDC85AQ96PX6 553 aaPredicted RBP23.14■■□□□ 1.3
PCDHA4-201ENST00000378125 HIP1O00291 1037 aa23.14■■□□□ 1.29
PCDHA4-201ENST00000378125 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.29
PCDHA4-201ENST00000378125 RBM27Q9P2N5 1060 aaKnown RBP23.14■■□□□ 1.29
PCDHA4-201ENST00000378125 LIMCH1Q9UPQ0 1083 aa23.14■■□□□ 1.29
PCDHA4-201ENST00000378125 GPT2Q8TD30 523 aa23.13■■□□□ 1.29
PCDHA4-201ENST00000378125 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
PCDHA4-201ENST00000378125 ATP5JP18859 108 aa23.13■■□□□ 1.29
PCDHA4-201ENST00000378125 TIMM10P62072 90 aa23.13■■□□□ 1.29
PCDHA4-201ENST00000378125 MAP4K1Q92918 833 aa23.13■■□□□ 1.29
PCDHA4-201ENST00000378125 LRRC24Q50LG9 513 aa23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 DDX46Q7L014 1031 aaKnown RBP23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 TCEANC2Q96MN5 208 aa23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 NSFL1CQ9UNZ2 370 aaKnown RBP23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 TOGARAM1Q9Y4F4 1720 aa23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
PCDHA4-201ENST00000378125 ZKSCAN1P17029 563 aaPredicted RBP23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 CYP46A1Q9Y6A2 500 aa23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 SLC27A2O14975 620 aa23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 CCDC129Q6ZRS4 1044 aa23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 ATG9AQ7Z3C6 839 aa23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 SYTL4Q96C24 671 aaPredicted RBP23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 SEC62Q99442 399 aaKnown RBP23.11■■□□□ 1.29
PCDHA4-201ENST00000378125 CCDC83Q8IWF9 413 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 CCDC191Q8NCU4 936 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 GDPD2Q9HCC8 539 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 COL15A1P39059 1388 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 SLFNL1Q499Z3 407 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms