RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
POLR1E-201ENST00000377792 SYCE3A1L190 88 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 HIP1O00291 1037 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
POLR1E-201ENST00000377792 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
POLR1E-201ENST00000377792 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 COL18A1P39060 1754 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 DCCP43146 1447 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 MRC1P22897 1456 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 NMIQ13287 307 aaPredicted RBP13.19□□□□□ -0.3
POLR1E-201ENST00000377792 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
POLR1E-201ENST00000377792 LARGE1O95461 756 aa13.18□□□□□ -0.3
POLR1E-201ENST00000377792 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
POLR1E-201ENST00000377792 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
POLR1E-201ENST00000377792 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
POLR1E-201ENST00000377792 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
POLR1E-201ENST00000377792 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
POLR1E-201ENST00000377792 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
POLR1E-201ENST00000377792 RBM8AQ9Y5S9 174 aaKnown RBP13.18□□□□□ -0.3
POLR1E-201ENST00000377792 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
POLR1E-201ENST00000377792 USP48Q86UV5 1035 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 CYP46A1Q9Y6A2 500 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 TNS3Q68CZ2 1445 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
POLR1E-201ENST00000377792 SYT1P21579 422 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 COPRSQ9NQ92 184 aa13.17□□□□□ -0.3
POLR1E-201ENST00000377792 STX6O43752 255 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 ZKSCAN1P17029 563 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 CABP4P57796 275 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 SH2B1Q9NRF2 756 aaPredicted RBP13.16□□□□□ -0.3
POLR1E-201ENST00000377792 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
POLR1E-201ENST00000377792 COL15A1P39059 1388 aa13.15□□□□□ -0.3
POLR1E-201ENST00000377792 KCNJ4P48050 445 aa13.15□□□□□ -0.3
POLR1E-201ENST00000377792 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
POLR1E-201ENST00000377792 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
POLR1E-201ENST00000377792 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
POLR1E-201ENST00000377792 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
POLR1E-201ENST00000377792 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.3
POLR1E-201ENST00000377792 SLC27A2O14975 620 aa13.15□□□□□ -0.31
POLR1E-201ENST00000377792 UBE3BQ7Z3V4 1068 aa13.15□□□□□ -0.31
POLR1E-201ENST00000377792 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.31
POLR1E-201ENST00000377792 CPDO75976 1380 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
POLR1E-201ENST00000377792 F13A1P00488 732 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 GJB2P29033 226 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
POLR1E-201ENST00000377792 ATP5JP18859 108 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 PSMA5P28066 241 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 TFCP2Q12800 502 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 ME3Q16798 604 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 DBNLQ9UJU6 430 aaKnown RBP13.13□□□□□ -0.31
POLR1E-201ENST00000377792 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 A0A087WZG4 1122 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 CASP7P55210 303 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
POLR1E-201ENST00000377792 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
POLR1E-201ENST00000377792 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
POLR1E-201ENST00000377792 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 RNF20Q5VTR2 975 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 ZNF589Q86UQ0 364 aaPredicted RBP13.12□□□□□ -0.31
POLR1E-201ENST00000377792 TSPY26PQ9H489 355 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 MTMR6Q9Y217 621 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 JCADQ9P266 1359 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 PHF14O94880 888 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
POLR1E-201ENST00000377792 DTNBO60941 627 aa13.11□□□□□ -0.31
POLR1E-201ENST00000377792 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
POLR1E-201ENST00000377792 TAF6LQ9Y6J9 622 aa13.11□□□□□ -0.31
POLR1E-201ENST00000377792 GLI3P10071 1580 aa13.11□□□□□ -0.31
POLR1E-201ENST00000377792 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms