RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 MTMR6Q9Y217 621 aa21.69■■□□□ 1.06
SF1-203ENST00000377387 ST3GAL1Q11201 340 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 DNTTIP2Q5QJE6 756 aaKnown RBP21.68■■□□□ 1.06
SF1-203ENST00000377387 VPS53Q5VIR6 699 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 ERC1Q8IUD2 1116 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 TPCN1Q9ULQ1 816 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 A0A0D9SFI3 127 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 NECTIN1Q15223 517 aa21.68■■□□□ 1.06
SF1-203ENST00000377387 USP42Q9H9J4 1324 aaKnown RBP21.67■■□□□ 1.06
SF1-203ENST00000377387 ADCY5O95622 1261 aa21.67■■□□□ 1.06
SF1-203ENST00000377387 C17orf53Q8N3J3 647 aaPredicted RBP21.67■■□□□ 1.06
SF1-203ENST00000377387 LINS1Q8NG48 757 aa21.67■■□□□ 1.06
SF1-203ENST00000377387 TTC12Q9H892 705 aaPredicted RBP21.67■■□□□ 1.06
SF1-203ENST00000377387 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
SF1-203ENST00000377387 UQCRHLA0A096LP55 91 aa21.66■■□□□ 1.06
SF1-203ENST00000377387 UQCRHP07919 91 aa21.66■■□□□ 1.06
SF1-203ENST00000377387 LARP1BQ659C4 914 aaKnown RBP21.66■■□□□ 1.06
SF1-203ENST00000377387 CABLES1Q8TDN4 633 aa21.66■■□□□ 1.06
SF1-203ENST00000377387 ATP6V1DQ9Y5K8 247 aa21.66■■□□□ 1.06
SF1-203ENST00000377387 DDX58O95786 925 aaKnown RBP21.66■■□□□ 1.06
SF1-203ENST00000377387 CHGBP05060 677 aa21.65■■□□□ 1.06
SF1-203ENST00000377387 IGKV5-2P06315 115 aa21.65■■□□□ 1.06
SF1-203ENST00000377387 TMEM87AQ8NBN3 555 aa21.65■■□□□ 1.06
SF1-203ENST00000377387 MYD88Q99836 296 aa21.65■■□□□ 1.06
SF1-203ENST00000377387 EPHA10Q5JZY3 1008 aa21.65■■□□□ 1.06
SF1-203ENST00000377387 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
SF1-203ENST00000377387 SLC27A2O14975 620 aa21.64■■□□□ 1.06
SF1-203ENST00000377387 CAMK4Q16566 473 aa21.64■■□□□ 1.05
SF1-203ENST00000377387 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
SF1-203ENST00000377387 XAGE3Q8WTP9 111 aa21.64■■□□□ 1.05
SF1-203ENST00000377387 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
SF1-203ENST00000377387 CDC37L1Q7L3B6 337 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 COPS6Q7L5N1 327 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 VSIG10Q8N0Z9 540 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 ZSCAN31Q96LW9 406 aaPredicted RBP21.63■■□□□ 1.05
SF1-203ENST00000377387 NLRP2Q9NX02 1062 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 TFIP11Q9UBB9 837 aaKnown RBP21.63■■□□□ 1.05
SF1-203ENST00000377387 NFAT5O94916 1531 aa21.63■■□□□ 1.05
SF1-203ENST00000377387 PDIA6Q15084 440 aa21.62■■□□□ 1.05
SF1-203ENST00000377387 KRT28Q7Z3Y7 464 aa21.62■■□□□ 1.05
SF1-203ENST00000377387 MAP4K1Q92918 833 aa21.62■■□□□ 1.05
SF1-203ENST00000377387 SH2B1Q9NRF2 756 aaPredicted RBP21.62■■□□□ 1.05
SF1-203ENST00000377387 KIAA2012Q0VF49 1180 aa21.62■■□□□ 1.05
SF1-203ENST00000377387 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
SF1-203ENST00000377387 MCM5P33992 734 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 NEXNQ0ZGT2 675 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 CSPP1Q1MSJ5 1256 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 GLIPR1L2Q4G1C9 344 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 FAM184AQ8NB25 1140 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 HDAC5Q9UQL6 1122 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
SF1-203ENST00000377387 TM6SF1Q9BZW5 370 aa21.61■■□□□ 1.05
SF1-203ENST00000377387 SPC24Q8NBT2 197 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 ADGRL3Q9HAR2 1447 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 ATP5J2-PTCD1G3V325 749 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 PTCD1O75127 700 aaKnown RBP21.6■■□□□ 1.05
SF1-203ENST00000377387 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 DNAJC2Q99543 621 aaKnown RBP21.6■■□□□ 1.05
SF1-203ENST00000377387 KDM3BQ7LBC6 1761 aa21.6■■□□□ 1.05
SF1-203ENST00000377387 CCDC129Q6ZRS4 1044 aa21.59■■□□□ 1.05
SF1-203ENST00000377387 TTC6Q86TZ1 520 aa21.59■■□□□ 1.05
SF1-203ENST00000377387 MED1Q15648 1581 aaPredicted RBP21.59■■□□□ 1.05
SF1-203ENST00000377387 CHD2O14647 1828 aaKnown RBP21.59■■□□□ 1.05
SF1-203ENST00000377387 NEURL1BA8MQ27 555 aa21.59■■□□□ 1.05
SF1-203ENST00000377387 RAPGEF4Q8WZA2 1011 aa21.59■■□□□ 1.05
SF1-203ENST00000377387 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
SF1-203ENST00000377387 LETM1O95202 739 aaPredicted RBP21.58■■□□□ 1.05
SF1-203ENST00000377387 PSMA5P28066 241 aa21.58■■□□□ 1.05
SF1-203ENST00000377387 UVSSAQ2YD98 709 aa21.58■■□□□ 1.05
SF1-203ENST00000377387 LARP1Q6PKG0 1096 aaKnown RBP21.58■■□□□ 1.05
SF1-203ENST00000377387 AP5Z1O43299 807 aa21.58■■□□□ 1.04
SF1-203ENST00000377387 KDM4AO75164 1064 aa21.58■■□□□ 1.04
SF1-203ENST00000377387 CKAP2LQ8IYA6 745 aa21.58■■□□□ 1.04
SF1-203ENST00000377387 SEC62Q99442 399 aaKnown RBP21.58■■□□□ 1.04
SF1-203ENST00000377387 LIG1P18858 919 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 FOSBP53539 338 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 GCKRQ14397 625 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
SF1-203ENST00000377387 LRRC2Q9BYS8 371 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.57■■□□□ 1.04
SF1-203ENST00000377387 HIP1O00291 1037 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 TFCP2Q12800 502 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 RNF20Q5VTR2 975 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 UBE3BQ7Z3V4 1068 aa21.57■■□□□ 1.04
SF1-203ENST00000377387 PPFIA3O75145 1194 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 KCNB2Q92953 911 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 KRT85P78386 507 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 TSC1Q92574 1164 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 DDX11Q96FC9 970 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 CSB-PGBD3P0DP91 1061 aa21.56■■□□□ 1.04
SF1-203ENST00000377387 GOLGA6L4A6NEF3 574 aa21.55■■□□□ 1.04
SF1-203ENST00000377387 JAK2O60674 1132 aa21.55■■□□□ 1.04
SF1-203ENST00000377387 RPS6KB1P23443 525 aa21.55■■□□□ 1.04
SF1-203ENST00000377387 TOB2Q14106 344 aaPredicted RBP21.55■■□□□ 1.04
SF1-203ENST00000377387 SLFNL1Q499Z3 407 aa21.55■■□□□ 1.04
SF1-203ENST00000377387 ANKRD13DQ6ZTN6 518 aa21.55■■□□□ 1.04
SF1-203ENST00000377387 PDCL3Q9H2J4 239 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms