RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 RTL5Q5HYW3 569 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-203ENST00000377344 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
CBWD3-203ENST00000377344 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-203ENST00000377344 ZNF34Q8IZ26 560 aa16.26■□□□□ 0.19
CBWD3-203ENST00000377344 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-203ENST00000377344 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
CBWD3-203ENST00000377344 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
CBWD3-203ENST00000377344 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
CBWD3-203ENST00000377344 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
CBWD3-203ENST00000377344 GNAI2P04899 355 aa16.25■□□□□ 0.19
CBWD3-203ENST00000377344 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
CBWD3-203ENST00000377344 UBN2Q6ZU65 1347 aa16.25■□□□□ 0.19
CBWD3-203ENST00000377344 RGL2O15211 777 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 LRRFIP2Q9Y608 721 aaKnown RBP16.24■□□□□ 0.19
CBWD3-203ENST00000377344 GYS1P13807 737 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 SETDB2Q96T68 719 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
CBWD3-203ENST00000377344 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
CBWD3-203ENST00000377344 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
CBWD3-203ENST00000377344 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
CBWD3-203ENST00000377344 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
CBWD3-203ENST00000377344 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
CBWD3-203ENST00000377344 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-203ENST00000377344 UTYO14607 1347 aa16.22■□□□□ 0.19
CBWD3-203ENST00000377344 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-203ENST00000377344 H7C1W4 665 aa16.22■□□□□ 0.19
CBWD3-203ENST00000377344 PCCAP05165 728 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-203ENST00000377344 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
CBWD3-203ENST00000377344 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
CBWD3-203ENST00000377344 NPHP1O15259 732 aa16.21■□□□□ 0.19
CBWD3-203ENST00000377344 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
CBWD3-203ENST00000377344 NFIXQ14938 502 aa16.2■□□□□ 0.18
CBWD3-203ENST00000377344 SYNE4Q8N205 404 aa16.2■□□□□ 0.18
CBWD3-203ENST00000377344 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 CASP7P55210 303 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 MSL1Q68DK7 614 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-203ENST00000377344 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 NTSR2O95665 410 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
CBWD3-203ENST00000377344 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
CBWD3-203ENST00000377344 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
CBWD3-203ENST00000377344 QSER1Q2KHR3 1735 aa16.18■□□□□ 0.18
CBWD3-203ENST00000377344 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-203ENST00000377344 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
CBWD3-203ENST00000377344 NYXQ9GZU5 481 aa16.18■□□□□ 0.18
CBWD3-203ENST00000377344 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
CBWD3-203ENST00000377344 TPTE2Q6XPS3 522 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 ANKRD44Q8N8A2 993 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
CBWD3-203ENST00000377344 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 TM4SF1P30408 202 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
CBWD3-203ENST00000377344 EPHA10Q5JZY3 1008 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
CBWD3-203ENST00000377344 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 HMMRO75330 724 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 IGHDP01880 384 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 HCLS1P14317 486 aaPredicted RBP16.16■□□□□ 0.18
CBWD3-203ENST00000377344 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 ERFEQ4G0M1 354 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
CBWD3-203ENST00000377344 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 SERPINB2P05120 415 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 CCDC24Q8N4L8 307 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 MMP10P09238 476 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
CBWD3-203ENST00000377344 FOXO4P98177 505 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 DDR1Q08345 913 aa16.15■□□□□ 0.18
CBWD3-203ENST00000377344 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-203ENST00000377344 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
CBWD3-203ENST00000377344 PDE8AO60658 829 aa16.14■□□□□ 0.17
CBWD3-203ENST00000377344 CCDC85AQ96PX6 553 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-203ENST00000377344 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
CBWD3-203ENST00000377344 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
CBWD3-203ENST00000377344 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-203ENST00000377344 CTSWP56202 376 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 ST5P78524 1137 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 MTX1Q13505 466 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 RABL6Q3YEC7 729 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-203ENST00000377344 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 CENPQQ7L2Z9 268 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-203ENST00000377344 SSH3Q8TE77 659 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 SLC16A10Q8TF71 515 aa16.12■□□□□ 0.17
CBWD3-203ENST00000377344 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
CBWD3-203ENST00000377344 ZBTB7AO95365 584 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 POLA2Q14181 598 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 TTLL11Q8NHH1 800 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 NLRP3Q96P20 1036 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
CBWD3-203ENST00000377344 FAM161AQ3B820 660 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms