RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 ZBTB38Q8NAP3 1195 aaPredicted RBP22.46■■□□□ 1.19
IRF3-203ENST00000377139 RGS17Q9UGC6 210 aaPredicted RBP22.46■■□□□ 1.19
IRF3-203ENST00000377139 APBB1O00213 710 aa22.46■■□□□ 1.19
IRF3-203ENST00000377139 EPHA10Q5JZY3 1008 aa22.46■■□□□ 1.19
IRF3-203ENST00000377139 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
IRF3-203ENST00000377139 BACH2Q9BYV9 841 aa22.46■■□□□ 1.19
IRF3-203ENST00000377139 ERC1Q8IUD2 1116 aa22.45■■□□□ 1.18
IRF3-203ENST00000377139 ZNF34Q8IZ26 560 aa22.45■■□□□ 1.18
IRF3-203ENST00000377139 JARID2Q92833 1246 aaPredicted RBP22.45■■□□□ 1.18
IRF3-203ENST00000377139 KIF1BPQ96EK5 621 aa22.45■■□□□ 1.18
IRF3-203ENST00000377139 SCN7AQ01118 1682 aa22.44■■□□□ 1.18
IRF3-203ENST00000377139 CDHR2Q9BYE9 1310 aa22.44■■□□□ 1.18
IRF3-203ENST00000377139 GPTP24298 496 aa22.43■■□□□ 1.18
IRF3-203ENST00000377139 CLEC4GQ6UXB4 293 aa22.43■■□□□ 1.18
IRF3-203ENST00000377139 RTCBQ9Y3I0 505 aaKnown RBP22.43■■□□□ 1.18
IRF3-203ENST00000377139 GNPATO15228 680 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 SMARCA5O60264 1052 aaPredicted RBP22.42■■□□□ 1.18
IRF3-203ENST00000377139 FOXO4P98177 505 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 PARP10Q53GL7 1025 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 PLA2G12BQ9BX93 195 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 OS9Q13438 667 aaPredicted RBP22.42■■□□□ 1.18
IRF3-203ENST00000377139 POTEAQ6S8J7 498 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 PLEKHM2Q8IWE5 1019 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 RHPN1Q8TCX5 695 aa22.42■■□□□ 1.18
IRF3-203ENST00000377139 C8orf34Q49A92 452 aa22.41■■□□□ 1.18
IRF3-203ENST00000377139 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
IRF3-203ENST00000377139 LMBR1LQ6UX01 489 aa22.41■■□□□ 1.18
IRF3-203ENST00000377139 UBN2Q6ZU65 1347 aa22.41■■□□□ 1.18
IRF3-203ENST00000377139 BMP2KLQ5H9B9 411 aa22.4■■□□□ 1.18
IRF3-203ENST00000377139 AK7Q96M32 723 aa22.4■■□□□ 1.18
IRF3-203ENST00000377139 COPRSQ9NQ92 184 aa22.4■■□□□ 1.18
IRF3-203ENST00000377139 TRMT112Q9UI30 125 aaKnown RBP22.4■■□□□ 1.18
IRF3-203ENST00000377139 G3BP1Q13283 466 aaKnown RBP eCLIP22.39■■□□□ 1.18
IRF3-203ENST00000377139 FAM89AQ96GI7 184 aa22.39■■□□□ 1.18
IRF3-203ENST00000377139 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.18
IRF3-203ENST00000377139 RFX5P48382 616 aaPredicted RBP22.39■■□□□ 1.17
IRF3-203ENST00000377139 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
IRF3-203ENST00000377139 PA2G4Q9UQ80 394 aaKnown RBP22.39■■□□□ 1.17
IRF3-203ENST00000377139 MYH3P11055 1940 aa22.38■■□□□ 1.17
IRF3-203ENST00000377139 PLSCR1O15162 318 aa22.38■■□□□ 1.17
IRF3-203ENST00000377139 C16orf71Q8IYS4 520 aaPredicted RBP22.38■■□□□ 1.17
IRF3-203ENST00000377139 OSBPL3Q9H4L5 887 aa22.38■■□□□ 1.17
IRF3-203ENST00000377139 RBM19Q9Y4C8 960 aaKnown RBP22.38■■□□□ 1.17
IRF3-203ENST00000377139 ADRA2BP18089 450 aa22.37■■□□□ 1.17
IRF3-203ENST00000377139 NIP7Q9Y221 180 aaKnown RBP eCLIP22.37■■□□□ 1.17
IRF3-203ENST00000377139 CHMP3Q9Y3E7 222 aa22.37■■□□□ 1.17
IRF3-203ENST00000377139 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
IRF3-203ENST00000377139 ZPR1O75312 459 aa22.36■■□□□ 1.17
IRF3-203ENST00000377139 HSP90B1P14625 803 aaKnown RBP22.36■■□□□ 1.17
IRF3-203ENST00000377139 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
IRF3-203ENST00000377139 UTP14AQ9BVJ6 771 aaKnown RBP22.36■■□□□ 1.17
IRF3-203ENST00000377139 RGPD3A6NKT7 1758 aaPredicted RBP22.36■■□□□ 1.17
IRF3-203ENST00000377139 RGPD4Q7Z3J3 1758 aa22.36■■□□□ 1.17
IRF3-203ENST00000377139 SH3TC1Q8TE82 1336 aa22.36■■□□□ 1.17
IRF3-203ENST00000377139 SALL3Q9BXA9 1300 aa22.36■■□□□ 1.17
IRF3-203ENST00000377139 UBR3Q6ZT12 1888 aa22.36■■□□□ 1.17
IRF3-203ENST00000377139 IRS4O14654 1257 aaPredicted RBP22.35■■□□□ 1.17
IRF3-203ENST00000377139 CLASRPQ8N2M8 674 aaKnown RBP22.35■■□□□ 1.17
IRF3-203ENST00000377139 BCL11AQ9H165 835 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 IL1RAPL2Q9NP60 686 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 TNS1Q9HBL0 1735 aaKnown RBP22.35■■□□□ 1.17
IRF3-203ENST00000377139 LAMB2P55268 1798 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 PDE8AO60658 829 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 TXNRD1Q16881 649 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 TTC22Q5TAA0 569 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
IRF3-203ENST00000377139 OTUD7AQ8TE49 926 aaPredicted RBP22.35■■□□□ 1.17
IRF3-203ENST00000377139 AOX1Q06278 1338 aa22.34■■□□□ 1.17
IRF3-203ENST00000377139 CSF1RP07333 972 aa22.34■■□□□ 1.17
IRF3-203ENST00000377139 MX1P20591 662 aa22.34■■□□□ 1.17
IRF3-203ENST00000377139 PDE1AP54750 535 aa22.34■■□□□ 1.17
IRF3-203ENST00000377139 TRAPPC3LQ5T215 181 aa22.34■■□□□ 1.17
IRF3-203ENST00000377139 APBA3O96018 575 aa22.33■■□□□ 1.17
IRF3-203ENST00000377139 CTSWP56202 376 aa22.33■■□□□ 1.17
IRF3-203ENST00000377139 CCDC57Q2TAC2 916 aa22.33■■□□□ 1.17
IRF3-203ENST00000377139 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
IRF3-203ENST00000377139 SIL1Q9H173 461 aa22.33■■□□□ 1.17
IRF3-203ENST00000377139 STAP2Q9UGK3 403 aa22.33■■□□□ 1.17
IRF3-203ENST00000377139 RFC4P35249 363 aa22.32■■□□□ 1.16
IRF3-203ENST00000377139 USPL1Q5W0Q7 1092 aa22.32■■□□□ 1.16
IRF3-203ENST00000377139 KLHDC4Q8TBB5 520 aa22.32■■□□□ 1.16
IRF3-203ENST00000377139 USP42Q9H9J4 1324 aaKnown RBP22.32■■□□□ 1.16
IRF3-203ENST00000377139 COL24A1Q17RW2 1714 aa22.32■■□□□ 1.16
IRF3-203ENST00000377139 SASH1O94885 1247 aa22.31■■□□□ 1.16
IRF3-203ENST00000377139 NTSR2O95665 410 aa22.31■■□□□ 1.16
IRF3-203ENST00000377139 SSFA2P28290 1259 aa22.31■■□□□ 1.16
IRF3-203ENST00000377139 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
IRF3-203ENST00000377139 FBXO3Q9UK99 471 aa22.31■■□□□ 1.16
IRF3-203ENST00000377139 GSPT1P15170 499 aaKnown RBP22.3■■□□□ 1.16
IRF3-203ENST00000377139 IFIT5Q13325 482 aaKnown RBP22.3■■□□□ 1.16
IRF3-203ENST00000377139 SYNE4Q8N205 404 aa22.3■■□□□ 1.16
IRF3-203ENST00000377139 TTLL11Q8NHH1 800 aa22.3■■□□□ 1.16
IRF3-203ENST00000377139 DDX60Q8IY21 1712 aaKnown RBP22.3■■□□□ 1.16
IRF3-203ENST00000377139 CIAO1O76071 339 aa22.29■■□□□ 1.16
IRF3-203ENST00000377139 PHF14O94880 888 aa22.29■■□□□ 1.16
IRF3-203ENST00000377139 PROM2Q8N271 834 aa22.29■■□□□ 1.16
IRF3-203ENST00000377139 SRP68Q9UHB9 627 aaKnown RBP22.29■■□□□ 1.16
IRF3-203ENST00000377139 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
IRF3-203ENST00000377139 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
IRF3-203ENST00000377139 AMIGO3Q86WK7 504 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms