RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
IRF3-202ENST00000377135 HYPKQ9NX55 129 aa23.14■■□□□ 1.29
IRF3-202ENST00000377135 ABCC12Q96J65 1359 aa23.13■■□□□ 1.29
IRF3-202ENST00000377135 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
IRF3-202ENST00000377135 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
IRF3-202ENST00000377135 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
IRF3-202ENST00000377135 HSPA6P17066 643 aa23.12■■□□□ 1.29
IRF3-202ENST00000377135 HOXA10P31260 410 aaPredicted RBP23.12■■□□□ 1.29
IRF3-202ENST00000377135 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
IRF3-202ENST00000377135 NLRP10Q86W26 655 aa23.12■■□□□ 1.29
IRF3-202ENST00000377135 RTKN2Q8IZC4 609 aa23.12■■□□□ 1.29
IRF3-202ENST00000377135 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
IRF3-202ENST00000377135 RBM17Q96I25 401 aaKnown RBP23.11■■□□□ 1.29
IRF3-202ENST00000377135 VEGFAP15692 232 aaPredicted RBP23.1■■□□□ 1.29
IRF3-202ENST00000377135 C8orf58Q8NAV2 365 aa23.1■■□□□ 1.29
IRF3-202ENST00000377135 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
IRF3-202ENST00000377135 RBM46Q8TBY0 533 aaKnown RBP23.09■■□□□ 1.29
IRF3-202ENST00000377135 CRAMP1Q96RY5 1269 aa23.09■■□□□ 1.29
IRF3-202ENST00000377135 FKBP4Q02790 459 aaKnown RBP eCLIP23.08■■□□□ 1.29
IRF3-202ENST00000377135 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
IRF3-202ENST00000377135 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
IRF3-202ENST00000377135 WWC1Q8IX03 1113 aa23.08■■□□□ 1.29
IRF3-202ENST00000377135 CCDC88AQ3V6T2 1871 aa23.08■■□□□ 1.29
IRF3-202ENST00000377135 CC2D2BQ6DHV5 1058 aa23.08■■□□□ 1.28
IRF3-202ENST00000377135 SYNE4Q8N205 404 aa23.08■■□□□ 1.28
IRF3-202ENST00000377135 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.28
IRF3-202ENST00000377135 ZNF277Q9NRM2 450 aaPredicted RBP23.08■■□□□ 1.28
IRF3-202ENST00000377135 FER1L6Q2WGJ9 1857 aa23.07■■□□□ 1.28
IRF3-202ENST00000377135 TCERG1O14776 1098 aaKnown RBP23.07■■□□□ 1.28
IRF3-202ENST00000377135 HCLS1P14317 486 aaPredicted RBP23.07■■□□□ 1.28
IRF3-202ENST00000377135 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
IRF3-202ENST00000377135 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
IRF3-202ENST00000377135 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 CCDC30Q5VVM6 783 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 RIC3Q7Z5B4 369 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 PHAXQ9H814 394 aaKnown RBP23.05■■□□□ 1.28
IRF3-202ENST00000377135 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 RIC1Q4ADV7 1423 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 CACNA1SQ13698 1873 aa23.05■■□□□ 1.28
IRF3-202ENST00000377135 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
IRF3-202ENST00000377135 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
IRF3-202ENST00000377135 ISCA1Q9BUE6 129 aa23.04■■□□□ 1.28
IRF3-202ENST00000377135 TMX4Q9H1E5 349 aaPredicted RBP23.04■■□□□ 1.28
IRF3-202ENST00000377135 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
IRF3-202ENST00000377135 DDNO94850 711 aaPredicted RBP23.03■■□□□ 1.28
IRF3-202ENST00000377135 FSTL1Q12841 308 aa23.03■■□□□ 1.28
IRF3-202ENST00000377135 GRIPAP1Q4V328 841 aa23.03■■□□□ 1.28
IRF3-202ENST00000377135 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
IRF3-202ENST00000377135 POTECB2RU33 542 aa23.02■■□□□ 1.28
IRF3-202ENST00000377135 PPEF1O14829 653 aaPredicted RBP23.02■■□□□ 1.28
IRF3-202ENST00000377135 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
IRF3-202ENST00000377135 TNRC6CQ9HCJ0 1690 aaKnown RBP23.01■■□□□ 1.27
IRF3-202ENST00000377135 BBOX1O75936 387 aa23.01■■□□□ 1.27
IRF3-202ENST00000377135 IARSP41252 1262 aaKnown RBP23.01■■□□□ 1.27
IRF3-202ENST00000377135 TRIM28Q13263 835 aaKnown RBP23.01■■□□□ 1.27
IRF3-202ENST00000377135 FAM89AQ96GI7 184 aa23.01■■□□□ 1.27
IRF3-202ENST00000377135 PSMD1Q99460 953 aa23.01■■□□□ 1.27
IRF3-202ENST00000377135 ARFGEF2Q9Y6D5 1785 aa23.01■■□□□ 1.27
IRF3-202ENST00000377135 APLP1P51693 650 aa23■■□□□ 1.27
IRF3-202ENST00000377135 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
IRF3-202ENST00000377135 SMC1BQ8NDV3 1235 aa23■■□□□ 1.27
IRF3-202ENST00000377135 IL16Q14005 1332 aa23■■□□□ 1.27
IRF3-202ENST00000377135 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
IRF3-202ENST00000377135 ATP6V0A2Q9Y487 856 aa22.99■■□□□ 1.27
IRF3-202ENST00000377135 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
IRF3-202ENST00000377135 RTL5Q5HYW3 569 aaPredicted RBP22.99■■□□□ 1.27
IRF3-202ENST00000377135 JDP2Q8WYK2 163 aa22.99■■□□□ 1.27
IRF3-202ENST00000377135 DDX58O95786 925 aaKnown RBP22.98■■□□□ 1.27
IRF3-202ENST00000377135 DICER1Q9UPY3 1922 aaKnown RBP22.98■■□□□ 1.27
IRF3-202ENST00000377135 ABCC4O15439 1325 aa22.97■■□□□ 1.27
IRF3-202ENST00000377135 TWISTNBQ3B726 338 aaPredicted RBP22.97■■□□□ 1.27
IRF3-202ENST00000377135 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
IRF3-202ENST00000377135 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
IRF3-202ENST00000377135 MYD88Q99836 296 aa22.96■■□□□ 1.27
IRF3-202ENST00000377135 STK31Q9BXU1 1019 aa22.96■■□□□ 1.27
IRF3-202ENST00000377135 FZD9O00144 591 aa22.95■■□□□ 1.26
IRF3-202ENST00000377135 SLC51AQ86UW1 340 aa22.95■■□□□ 1.26
IRF3-202ENST00000377135 LARGE2Q8N3Y3 721 aa22.95■■□□□ 1.26
IRF3-202ENST00000377135 TIAM2Q8IVF5 1701 aa22.95■■□□□ 1.26
IRF3-202ENST00000377135 IRS4O14654 1257 aaPredicted RBP22.94■■□□□ 1.26
IRF3-202ENST00000377135 GRAPQ13588 217 aa22.94■■□□□ 1.26
IRF3-202ENST00000377135 SF3B3Q15393 1217 aaKnown RBP22.94■■□□□ 1.26
IRF3-202ENST00000377135 GRAPLQ8TC17 118 aaPredicted RBP22.94■■□□□ 1.26
IRF3-202ENST00000377135 METTL22Q9BUU2 404 aaPredicted RBP22.94■■□□□ 1.26
IRF3-202ENST00000377135 IQCA1LA6NCM1 817 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 SLC4A2P04920 1241 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 KSR2Q6VAB6 950 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 ZBTB38Q8NAP3 1195 aaPredicted RBP22.93■■□□□ 1.26
IRF3-202ENST00000377135 CCDC191Q8NCU4 936 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 SNED1Q8TER0 1413 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 ZNF541Q9H0D2 1346 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 ANKRD36CQ5JPF3 1778 aa22.93■■□□□ 1.26
IRF3-202ENST00000377135 MPNDQ8N594 471 aa22.92■■□□□ 1.26
IRF3-202ENST00000377135 L3MBTL3Q96JM7 780 aaPredicted RBP22.92■■□□□ 1.26
IRF3-202ENST00000377135 MAP3K2Q9Y2U5 619 aa22.92■■□□□ 1.26
IRF3-202ENST00000377135 PI4KAP2A4QPH2 592 aa22.91■■□□□ 1.26
IRF3-202ENST00000377135 HSP90B1P14625 803 aaKnown RBP22.91■■□□□ 1.26
IRF3-202ENST00000377135 EIF6P56537 245 aaKnown RBP22.91■■□□□ 1.26
IRF3-202ENST00000377135 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
IRF3-202ENST00000377135 PI4KAP1Q8N8J0 262 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms