RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
TIMP1-202ENST00000377017 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
TIMP1-202ENST00000377017 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
TIMP1-202ENST00000377017 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
TIMP1-202ENST00000377017 UBN2Q6ZU65 1347 aa16.63■□□□□ 0.25
TIMP1-202ENST00000377017 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
TIMP1-202ENST00000377017 TPTE2Q6XPS3 522 aa16.62■□□□□ 0.25
TIMP1-202ENST00000377017 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
TIMP1-202ENST00000377017 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
TIMP1-202ENST00000377017 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
TIMP1-202ENST00000377017 POLRMTO00411 1230 aaKnown RBP16.61■□□□□ 0.25
TIMP1-202ENST00000377017 SERPINB2P05120 415 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
TIMP1-202ENST00000377017 GCKRQ14397 625 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 SUSD4Q5VX71 490 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 PANK1Q8TE04 598 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
TIMP1-202ENST00000377017 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
TIMP1-202ENST00000377017 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
TIMP1-202ENST00000377017 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
TIMP1-202ENST00000377017 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
TIMP1-202ENST00000377017 PCCAP05165 728 aaPredicted RBP16.6■□□□□ 0.25
TIMP1-202ENST00000377017 ST5P78524 1137 aa16.6■□□□□ 0.25
TIMP1-202ENST00000377017 DDR1Q08345 913 aa16.6■□□□□ 0.25
TIMP1-202ENST00000377017 MVPQ14764 893 aaKnown RBP16.6■□□□□ 0.25
TIMP1-202ENST00000377017 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
TIMP1-202ENST00000377017 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
TIMP1-202ENST00000377017 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
TIMP1-202ENST00000377017 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
TIMP1-202ENST00000377017 GRM8O00222 908 aa16.59■□□□□ 0.25
TIMP1-202ENST00000377017 NTSR2O95665 410 aa16.59■□□□□ 0.25
TIMP1-202ENST00000377017 RLBP1P12271 317 aa16.59■□□□□ 0.25
TIMP1-202ENST00000377017 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
TIMP1-202ENST00000377017 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 GNAI3P08754 354 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 UBE3BQ7Z3V4 1068 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
TIMP1-202ENST00000377017 LAMB2P55268 1798 aa16.56■□□□□ 0.24
TIMP1-202ENST00000377017 H7C1W4 665 aa16.56■□□□□ 0.24
TIMP1-202ENST00000377017 UBTFL1P0CB47 393 aaPredicted RBP16.56■□□□□ 0.24
TIMP1-202ENST00000377017 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
TIMP1-202ENST00000377017 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
TIMP1-202ENST00000377017 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
TIMP1-202ENST00000377017 UTYO14607 1347 aa16.55■□□□□ 0.24
TIMP1-202ENST00000377017 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
TIMP1-202ENST00000377017 SGIP1Q9BQI5 828 aa16.55■□□□□ 0.24
TIMP1-202ENST00000377017 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
TIMP1-202ENST00000377017 NEFLP07196 543 aa16.54■□□□□ 0.24
TIMP1-202ENST00000377017 PTGER2P43116 358 aa16.54■□□□□ 0.24
TIMP1-202ENST00000377017 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
TIMP1-202ENST00000377017 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
TIMP1-202ENST00000377017 MYH3P11055 1940 aa16.54■□□□□ 0.24
TIMP1-202ENST00000377017 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
TIMP1-202ENST00000377017 PDE8AO60658 829 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
TIMP1-202ENST00000377017 SLC10A5Q5PT55 438 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 MEIS3Q99687 375 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
TIMP1-202ENST00000377017 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
TIMP1-202ENST00000377017 GNAI2P04899 355 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 PDE6BP35913 854 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 CASP7P55210 303 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.24
TIMP1-202ENST00000377017 BRIP1Q9BX63 1249 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 PLA2G12BQ9BX93 195 aa16.52■□□□□ 0.24
TIMP1-202ENST00000377017 KIF13BQ9NQT8 1826 aa16.52■□□□□ 0.23
TIMP1-202ENST00000377017 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
TIMP1-202ENST00000377017 AAMPQ13685 434 aa16.51■□□□□ 0.23
TIMP1-202ENST00000377017 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
TIMP1-202ENST00000377017 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
TIMP1-202ENST00000377017 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
TIMP1-202ENST00000377017 LRP5O75197 1615 aa16.5■□□□□ 0.23
TIMP1-202ENST00000377017 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
TIMP1-202ENST00000377017 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
TIMP1-202ENST00000377017 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
TIMP1-202ENST00000377017 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
TIMP1-202ENST00000377017 CTSWP56202 376 aa16.49■□□□□ 0.23
TIMP1-202ENST00000377017 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
TIMP1-202ENST00000377017 CD2APQ9Y5K6 639 aa16.49■□□□□ 0.23
TIMP1-202ENST00000377017 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
TIMP1-202ENST00000377017 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
TIMP1-202ENST00000377017 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
TIMP1-202ENST00000377017 TGFB2P61812 414 aa16.47■□□□□ 0.23
TIMP1-202ENST00000377017 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
TIMP1-202ENST00000377017 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
TIMP1-202ENST00000377017 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
TIMP1-202ENST00000377017 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
TIMP1-202ENST00000377017 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
TIMP1-202ENST00000377017 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
TIMP1-202ENST00000377017 H0YIN7 160 aa16.46■□□□□ 0.23
TIMP1-202ENST00000377017 FOXO4P98177 505 aa16.46■□□□□ 0.23
TIMP1-202ENST00000377017 RABL6Q3YEC7 729 aaPredicted RBP16.46■□□□□ 0.23
TIMP1-202ENST00000377017 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 270.9 ms