RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 AACSQ86V21 672 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 TBC1D2BQ9UPU7 963 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 AOX1Q06278 1338 aa15.83■□□□□ 0.12
TRIM40-206ENST00000376724 GPTP24298 496 aa15.83■□□□□ 0.12
TRIM40-206ENST00000376724 PI4K2BQ8TCG2 481 aa15.83■□□□□ 0.12
TRIM40-206ENST00000376724 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
TRIM40-206ENST00000376724 TJP1Q07157 1748 aa15.83■□□□□ 0.12
TRIM40-206ENST00000376724 RFX5P48382 616 aaPredicted RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 PTPN12Q05209 780 aaKnown RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 GIGYF2Q6Y7W6 1299 aaKnown RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 COL15A1P39059 1388 aa15.82■□□□□ 0.12
TRIM40-206ENST00000376724 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 ITPK1Q13572 414 aa15.82■□□□□ 0.12
TRIM40-206ENST00000376724 FAM182BQ5T319 152 aa15.82■□□□□ 0.12
TRIM40-206ENST00000376724 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
TRIM40-206ENST00000376724 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
TRIM40-206ENST00000376724 IL6STP40189 918 aaPredicted RBP15.81■□□□□ 0.12
TRIM40-206ENST00000376724 EAF2Q96CJ1 260 aaPredicted RBP15.81■□□□□ 0.12
TRIM40-206ENST00000376724 FAM89AQ96GI7 184 aa15.81■□□□□ 0.12
TRIM40-206ENST00000376724 CCDC87Q9NVE4 849 aa15.81■□□□□ 0.12
TRIM40-206ENST00000376724 EIF5BO60841 1220 aaKnown RBP15.8■□□□□ 0.12
TRIM40-206ENST00000376724 INTS5Q6P9B9 1019 aaKnown RBP15.8■□□□□ 0.12
TRIM40-206ENST00000376724 AFF2P51816 1311 aa15.8■□□□□ 0.12
TRIM40-206ENST00000376724 ERC2O15083 957 aa15.8■□□□□ 0.12
TRIM40-206ENST00000376724 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
TRIM40-206ENST00000376724 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
TRIM40-206ENST00000376724 TBC1D2Q9BYX2 928 aa15.8■□□□□ 0.12
TRIM40-206ENST00000376724 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
TRIM40-206ENST00000376724 DEKP35659 375 aaKnown RBP15.79■□□□□ 0.12
TRIM40-206ENST00000376724 TRIM28Q13263 835 aaKnown RBP15.79■□□□□ 0.12
TRIM40-206ENST00000376724 PTF1AQ7RTS3 328 aa15.79■□□□□ 0.12
TRIM40-206ENST00000376724 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
TRIM40-206ENST00000376724 ECHDC1Q9NTX5 307 aa15.79■□□□□ 0.12
TRIM40-206ENST00000376724 GLRX3O76003 335 aaKnown RBP15.78■□□□□ 0.12
TRIM40-206ENST00000376724 CHMLP26374 656 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 KCNQ4P56696 695 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 TFCP2Q12800 502 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 HSP90AB3PQ58FF7 597 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 SYNE4Q8N205 404 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 CCDC85AQ96PX6 553 aaPredicted RBP15.78■□□□□ 0.12
TRIM40-206ENST00000376724 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
TRIM40-206ENST00000376724 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 REC8O95072 547 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
TRIM40-206ENST00000376724 NLRP10Q86W26 655 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
TRIM40-206ENST00000376724 USP42Q9H9J4 1324 aaKnown RBP15.78■□□□□ 0.12
TRIM40-206ENST00000376724 EIF5P55010 431 aaKnown RBP15.77■□□□□ 0.12
TRIM40-206ENST00000376724 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
TRIM40-206ENST00000376724 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.12
TRIM40-206ENST00000376724 KIF2CQ99661 725 aa15.77■□□□□ 0.12
TRIM40-206ENST00000376724 ERVV-1B6SEH8 477 aa15.77■□□□□ 0.11
TRIM40-206ENST00000376724 ESYT1Q9BSJ8 1104 aa15.77■□□□□ 0.11
TRIM40-206ENST00000376724 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
TRIM40-206ENST00000376724 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
TRIM40-206ENST00000376724 NBR1Q14596 966 aa15.75■□□□□ 0.11
TRIM40-206ENST00000376724 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
TRIM40-206ENST00000376724 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
TRIM40-206ENST00000376724 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
TRIM40-206ENST00000376724 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
TRIM40-206ENST00000376724 LRRC24Q50LG9 513 aa15.74■□□□□ 0.11
TRIM40-206ENST00000376724 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
TRIM40-206ENST00000376724 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
TRIM40-206ENST00000376724 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
TRIM40-206ENST00000376724 TRPC5Q9UL62 973 aaPredicted RBP15.74■□□□□ 0.11
TRIM40-206ENST00000376724 UBN2Q6ZU65 1347 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 LINC00116Q8NCU8 138 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
TRIM40-206ENST00000376724 NUP98P52948 1817 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 THSD7AQ9UPZ6 1657 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 ZNF34Q8IZ26 560 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
TRIM40-206ENST00000376724 DBNLQ9UJU6 430 aaKnown RBP15.73■□□□□ 0.11
TRIM40-206ENST00000376724 AK9Q5TCS8 1911 aa15.73■□□□□ 0.11
TRIM40-206ENST00000376724 EYA2O00167 538 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 SEPT12Q8IYM1 358 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 NEUROD6Q96NK8 337 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 PLA2G12BQ9BX93 195 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 IL25Q9H293 177 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 MYH14Q7Z406 1995 aaKnown RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 IL15P40933 162 aaPredicted RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 CWC27Q6UX04 472 aaKnown RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 DBNDD2Q9BQY9 259 aa15.72■□□□□ 0.11
TRIM40-206ENST00000376724 QTRT2Q9H974 415 aaKnown RBP15.72■□□□□ 0.11
TRIM40-206ENST00000376724 ANKRD36CQ5JPF3 1778 aa15.71■□□□□ 0.11
TRIM40-206ENST00000376724 CSF1RP07333 972 aa15.71■□□□□ 0.11
TRIM40-206ENST00000376724 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
TRIM40-206ENST00000376724 SUSD4Q5VX71 490 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 DIAPH3Q9NSV4 1193 aa15.7■□□□□ 0.1
TRIM40-206ENST00000376724 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
TRIM40-206ENST00000376724 CTSWP56202 376 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms