RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
PDPN-203ENST00000376061 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 ARXQ96QS3 562 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
PDPN-203ENST00000376061 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
PDPN-203ENST00000376061 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
PDPN-203ENST00000376061 PLSCR1O15162 318 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 APBA3O96018 575 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
PDPN-203ENST00000376061 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
PDPN-203ENST00000376061 MYH3P11055 1940 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 A0A087WZG4 1122 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
PDPN-203ENST00000376061 PROM2Q8N271 834 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 AK7Q96M32 723 aa13.09□□□□□ -0.31
PDPN-203ENST00000376061 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.31
PDPN-203ENST00000376061 CASP7P55210 303 aa13.08□□□□□ -0.31
PDPN-203ENST00000376061 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.31
PDPN-203ENST00000376061 SMIM5Q71RC9 77 aa13.08□□□□□ -0.31
PDPN-203ENST00000376061 SUCLG2Q96I99 432 aa13.08□□□□□ -0.31
PDPN-203ENST00000376061 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
PDPN-203ENST00000376061 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
PDPN-203ENST00000376061 GPTP24298 496 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
PDPN-203ENST00000376061 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 RGL2O15211 777 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 HMMRO75330 724 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 ZNF34Q8IZ26 560 aa13.07□□□□□ -0.32
PDPN-203ENST00000376061 H7C1W4 665 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 ATP8B2P98198 1209 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 MTX1Q13505 466 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
PDPN-203ENST00000376061 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
PDPN-203ENST00000376061 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
PDPN-203ENST00000376061 USP42Q9H9J4 1324 aaKnown RBP13.05□□□□□ -0.32
PDPN-203ENST00000376061 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 PHF14O94880 888 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 ZNF827Q17R98 1081 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 GCC1Q96CN9 775 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
PDPN-203ENST00000376061 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
PDPN-203ENST00000376061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
PDPN-203ENST00000376061 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
PDPN-203ENST00000376061 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
PDPN-203ENST00000376061 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
PDPN-203ENST00000376061 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
PDPN-203ENST00000376061 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
PDPN-203ENST00000376061 DCTPP1Q9H773 170 aa13.04□□□□□ -0.32
PDPN-203ENST00000376061 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
PDPN-203ENST00000376061 SSFA2P28290 1259 aa13.03□□□□□ -0.32
PDPN-203ENST00000376061 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
PDPN-203ENST00000376061 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
PDPN-203ENST00000376061 USPL1Q5W0Q7 1092 aa13.03□□□□□ -0.32
PDPN-203ENST00000376061 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
PDPN-203ENST00000376061 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
PDPN-203ENST00000376061 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDPN-203ENST00000376061 CDHR2Q9BYE9 1310 aa13.03□□□□□ -0.32
PDPN-203ENST00000376061 ZPR1O75312 459 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 RFC4P35249 363 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 FOXO4P98177 505 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 NUCB1Q02818 461 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 PARP10Q53GL7 1025 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
PDPN-203ENST00000376061 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 NTSR2O95665 410 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
PDPN-203ENST00000376061 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
PDPN-203ENST00000376061 SUSD4Q5VX71 490 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
PDPN-203ENST00000376061 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 LRP5O75197 1615 aa13.01□□□□□ -0.33
PDPN-203ENST00000376061 BAG6P46379 1132 aa13□□□□□ -0.33
PDPN-203ENST00000376061 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
PDPN-203ENST00000376061 TBC1D9BQ66K14 1250 aa13□□□□□ -0.33
PDPN-203ENST00000376061 SYNE4Q8N205 404 aa13□□□□□ -0.33
PDPN-203ENST00000376061 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
PDPN-203ENST00000376061 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
PDPN-203ENST00000376061 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms