RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
C6orf48-205ENST00000375640 PRELPP51888 382 aa25.8■■□□□ 1.72
C6orf48-205ENST00000375640 NLRP3Q96P20 1036 aa25.8■■□□□ 1.72
C6orf48-205ENST00000375640 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
C6orf48-205ENST00000375640 RIC1Q4ADV7 1423 aa25.8■■□□□ 1.72
C6orf48-205ENST00000375640 ANKRD31Q8N7Z5 1873 aa25.79■■□□□ 1.72
C6orf48-205ENST00000375640 RPGRQ92834 1020 aaKnown RBP25.79■■□□□ 1.72
C6orf48-205ENST00000375640 LTBP3Q9NS15 1303 aa25.79■■□□□ 1.72
C6orf48-205ENST00000375640 ISCA1Q9BUE6 129 aa25.78■■□□□ 1.72
C6orf48-205ENST00000375640 TAOK3Q9H2K8 898 aa25.78■■□□□ 1.72
C6orf48-205ENST00000375640 PHAXQ9H814 394 aaKnown RBP25.78■■□□□ 1.72
C6orf48-205ENST00000375640 TRMT112Q9UI30 125 aaKnown RBP25.78■■□□□ 1.72
C6orf48-205ENST00000375640 GOLGA2Q08379 1002 aa25.77■■□□□ 1.72
C6orf48-205ENST00000375640 TRIM28Q13263 835 aaKnown RBP25.77■■□□□ 1.72
C6orf48-205ENST00000375640 CCDC93Q567U6 631 aa25.77■■□□□ 1.72
C6orf48-205ENST00000375640 RIC3Q7Z5B4 369 aa25.77■■□□□ 1.72
C6orf48-205ENST00000375640 RBM17Q96I25 401 aaKnown RBP25.77■■□□□ 1.72
C6orf48-205ENST00000375640 CRAMP1Q96RY5 1269 aa25.77■■□□□ 1.72
C6orf48-205ENST00000375640 DLEC1Q9Y238 1755 aa25.77■■□□□ 1.72
C6orf48-205ENST00000375640 TWISTNBQ3B726 338 aaPredicted RBP25.76■■□□□ 1.71
C6orf48-205ENST00000375640 RTKN2Q8IZC4 609 aa25.76■■□□□ 1.71
C6orf48-205ENST00000375640 KDM2BQ8NHM5 1336 aa25.75■■□□□ 1.71
C6orf48-205ENST00000375640 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
C6orf48-205ENST00000375640 KIF3CO14782 793 aa25.75■■□□□ 1.71
C6orf48-205ENST00000375640 DDX58O95786 925 aaKnown RBP25.74■■□□□ 1.71
C6orf48-205ENST00000375640 CC2D2BQ6DHV5 1058 aa25.74■■□□□ 1.71
C6orf48-205ENST00000375640 C3orf67Q6ZVT6 689 aa25.74■■□□□ 1.71
C6orf48-205ENST00000375640 STK31Q9BXU1 1019 aa25.74■■□□□ 1.71
C6orf48-205ENST00000375640 FANCIQ9NVI1 1328 aa25.73■■□□□ 1.71
C6orf48-205ENST00000375640 ATP5J2-PTCD1G3V325 749 aa25.73■■□□□ 1.71
C6orf48-205ENST00000375640 NUP98P52948 1817 aa25.72■■□□□ 1.71
C6orf48-205ENST00000375640 COL11A2P13942 1736 aaPredicted RBP25.72■■□□□ 1.71
C6orf48-205ENST00000375640 HCLS1P14317 486 aaPredicted RBP25.72■■□□□ 1.71
C6orf48-205ENST00000375640 SYNE4Q8N205 404 aa25.72■■□□□ 1.71
C6orf48-205ENST00000375640 FKBP4Q02790 459 aaKnown RBP eCLIP25.71■■□□□ 1.71
C6orf48-205ENST00000375640 GRIPAP1Q4V328 841 aa25.71■■□□□ 1.71
C6orf48-205ENST00000375640 NMRK2Q9NPI5 230 aa25.71■■□□□ 1.71
C6orf48-205ENST00000375640 GLTPD2A6NH11 291 aa25.7■■□□□ 1.7
C6orf48-205ENST00000375640 MYH16Q9H6N6 1097 aa25.7■■□□□ 1.7
C6orf48-205ENST00000375640 DPY19L2Q6NUT2 758 aa25.69■■□□□ 1.7
C6orf48-205ENST00000375640 OLFM4Q6UX06 510 aa25.69■■□□□ 1.7
C6orf48-205ENST00000375640 FAM89AQ96GI7 184 aa25.69■■□□□ 1.7
C6orf48-205ENST00000375640 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
C6orf48-205ENST00000375640 VAMP4O75379 141 aa25.68■■□□□ 1.7
C6orf48-205ENST00000375640 SLC4A2P04920 1241 aa25.68■■□□□ 1.7
C6orf48-205ENST00000375640 KSR2Q6VAB6 950 aa25.68■■□□□ 1.7
C6orf48-205ENST00000375640 METTL22Q9BUU2 404 aaPredicted RBP25.68■■□□□ 1.7
C6orf48-205ENST00000375640 TCERG1O14776 1098 aaKnown RBP25.67■■□□□ 1.7
C6orf48-205ENST00000375640 BBOX1O75936 387 aa25.67■■□□□ 1.7
C6orf48-205ENST00000375640 EXOSC9Q06265 439 aaKnown RBP25.67■■□□□ 1.7
C6orf48-205ENST00000375640 CCDC191Q8NCU4 936 aa25.67■■□□□ 1.7
C6orf48-205ENST00000375640 MYD88Q99836 296 aa25.67■■□□□ 1.7
C6orf48-205ENST00000375640 TMX4Q9H1E5 349 aaPredicted RBP25.67■■□□□ 1.7
C6orf48-205ENST00000375640 RRAGCQ9HB90 399 aa25.67■■□□□ 1.7
C6orf48-205ENST00000375640 SPINK5Q9NQ38 1064 aaPredicted RBP25.67■■□□□ 1.7
C6orf48-205ENST00000375640 SLX4Q8IY92 1834 aa25.67■■□□□ 1.7
C6orf48-205ENST00000375640 PPEF1O14829 653 aaPredicted RBP25.66■■□□□ 1.7
C6orf48-205ENST00000375640 TOMM70O94826 608 aa25.66■■□□□ 1.7
C6orf48-205ENST00000375640 DDX46Q7L014 1031 aaKnown RBP25.66■■□□□ 1.7
C6orf48-205ENST00000375640 ZBTB38Q8NAP3 1195 aaPredicted RBP25.66■■□□□ 1.7
C6orf48-205ENST00000375640 PSMD1Q99460 953 aa25.66■■□□□ 1.7
C6orf48-205ENST00000375640 HSP90B1P14625 803 aaKnown RBP25.65■■□□□ 1.7
C6orf48-205ENST00000375640 ZNF428Q96B54 188 aa25.65■■□□□ 1.7
C6orf48-205ENST00000375640 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
C6orf48-205ENST00000375640 MAP3K2Q9Y2U5 619 aa25.65■■□□□ 1.7
C6orf48-205ENST00000375640 PI4KAP2A4QPH2 592 aa25.64■■□□□ 1.7
C6orf48-205ENST00000375640 SF3B3Q15393 1217 aaKnown RBP25.64■■□□□ 1.7
C6orf48-205ENST00000375640 PI4KAP1Q8N8J0 262 aa25.64■■□□□ 1.7
C6orf48-205ENST00000375640 ATP6V0A2Q9Y487 856 aa25.64■■□□□ 1.7
C6orf48-205ENST00000375640 ABCC4O15439 1325 aa25.63■■□□□ 1.69
C6orf48-205ENST00000375640 ZNF521Q96K83 1311 aa25.63■■□□□ 1.69
C6orf48-205ENST00000375640 IRS4O14654 1257 aaPredicted RBP25.63■■□□□ 1.69
C6orf48-205ENST00000375640 C16orf71Q8IYS4 520 aaPredicted RBP25.63■■□□□ 1.69
C6orf48-205ENST00000375640 CWC25Q9NXE8 425 aaPredicted RBP25.63■■□□□ 1.69
C6orf48-205ENST00000375640 TNRC6CQ9HCJ0 1690 aaKnown RBP25.63■■□□□ 1.69
C6orf48-205ENST00000375640 IARSP41252 1262 aaKnown RBP25.62■■□□□ 1.69
C6orf48-205ENST00000375640 GRAPQ13588 217 aa25.62■■□□□ 1.69
C6orf48-205ENST00000375640 G2E3Q7L622 706 aa25.62■■□□□ 1.69
C6orf48-205ENST00000375640 SP8Q8IXZ3 490 aa25.62■■□□□ 1.69
C6orf48-205ENST00000375640 GRAPLQ8TC17 118 aaPredicted RBP25.62■■□□□ 1.69
C6orf48-205ENST00000375640 PCCAP05165 728 aaPredicted RBP25.61■■□□□ 1.69
C6orf48-205ENST00000375640 VEGFAP15692 232 aaPredicted RBP25.61■■□□□ 1.69
C6orf48-205ENST00000375640 NEXNQ0ZGT2 675 aa25.61■■□□□ 1.69
C6orf48-205ENST00000375640 RTL5Q5HYW3 569 aaPredicted RBP25.61■■□□□ 1.69
C6orf48-205ENST00000375640 FLIIQ13045 1269 aa25.6■■□□□ 1.69
C6orf48-205ENST00000375640 TMC4Q7Z404 712 aa25.6■■□□□ 1.69
C6orf48-205ENST00000375640 SNED1Q8TER0 1413 aa25.6■■□□□ 1.69
C6orf48-205ENST00000375640 RBM46Q8TBY0 533 aaKnown RBP25.59■■□□□ 1.69
C6orf48-205ENST00000375640 SBF1O95248 1867 aa25.58■■□□□ 1.69
C6orf48-205ENST00000375640 IGKV5-2P06315 115 aa25.58■■□□□ 1.69
C6orf48-205ENST00000375640 JDP2Q8WYK2 163 aa25.57■■□□□ 1.68
C6orf48-205ENST00000375640 VPS33BQ9H267 617 aa25.57■■□□□ 1.68
C6orf48-205ENST00000375640 FER1L6Q2WGJ9 1857 aa25.57■■□□□ 1.68
C6orf48-205ENST00000375640 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
C6orf48-205ENST00000375640 DDNO94850 711 aaPredicted RBP25.56■■□□□ 1.68
C6orf48-205ENST00000375640 FKBP5Q13451 457 aaPredicted RBP25.56■■□□□ 1.68
C6orf48-205ENST00000375640 POTECB2RU33 542 aa25.55■■□□□ 1.68
C6orf48-205ENST00000375640 E9PSI1 815 aa25.55■■□□□ 1.68
C6orf48-205ENST00000375640 FZD9O00144 591 aa25.55■■□□□ 1.68
C6orf48-205ENST00000375640 PDE8AO60658 829 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms