RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
UBR4-201ENST00000375218 METP08581 1390 aa10.88□□□□□ -0.67
UBR4-201ENST00000375218 IPO5O00410 1097 aaKnown RBP10.87□□□□□ -0.67
UBR4-201ENST00000375218 BACH2Q9BYV9 841 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 LRPPRCP42704 1394 aaKnown RBP10.87□□□□□ -0.67
UBR4-201ENST00000375218 CPS1P31327 1500 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 TIMM44O43615 452 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 BRD3Q15059 726 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 OGFOD1Q8N543 542 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
UBR4-201ENST00000375218 SLIT1O75093 1534 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 ITFG2Q969R8 447 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 AGBL1Q96MI9 1066 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 CHST12Q9NRB3 414 aa10.87□□□□□ -0.67
UBR4-201ENST00000375218 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
UBR4-201ENST00000375218 GOLGA6L6A8MZA4 724 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 SCNN1AP37088 669 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 ALDH1L2Q3SY69 923 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 ZCCHC8Q6NZY4 707 aaKnown RBP10.86□□□□□ -0.67
UBR4-201ENST00000375218 GGT6Q6P531 493 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 KIF20BQ96Q89 1820 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 CRYBG1Q9Y4K1 1723 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 TNNI2P48788 182 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 CWC25Q9NXE8 425 aaPredicted RBP10.86□□□□□ -0.67
UBR4-201ENST00000375218 ZBED6P86452 979 aa10.86□□□□□ -0.67
UBR4-201ENST00000375218 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
UBR4-201ENST00000375218 PSMC1P62191 440 aaKnown RBP10.85□□□□□ -0.67
UBR4-201ENST00000375218 UVSSAQ2YD98 709 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 TSC1Q92574 1164 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
UBR4-201ENST00000375218 PAX7P23759 505 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 LARP1BQ659C4 914 aaKnown RBP10.85□□□□□ -0.67
UBR4-201ENST00000375218 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 ZMYM3Q14202 1370 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 DNAJC21Q5F1R6 531 aaKnown RBP10.85□□□□□ -0.67
UBR4-201ENST00000375218 TMEM132EQ6IEE7 984 aa10.85□□□□□ -0.67
UBR4-201ENST00000375218 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
UBR4-201ENST00000375218 ATP2B1P20020 1258 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
UBR4-201ENST00000375218 FAM43AQ8N2R8 423 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 ALKBH2Q6NS38 261 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 PRPF38AQ8NAV1 312 aaKnown RBP10.84□□□□□ -0.67
UBR4-201ENST00000375218 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 ABCF2Q9UG63 623 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 EVLQ9UI08 416 aaPredicted RBP10.84□□□□□ -0.67
UBR4-201ENST00000375218 ADGRB2O60241 1585 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 KCNA2P16389 499 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 SERPINB4P48594 390 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 CAPN10Q9HC96 672 aa10.84□□□□□ -0.67
UBR4-201ENST00000375218 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
UBR4-201ENST00000375218 UHMK1Q8TAS1 419 aaKnown RBP10.83□□□□□ -0.68
UBR4-201ENST00000375218 C14orf93Q9H972 538 aaKnown RBP10.83□□□□□ -0.68
UBR4-201ENST00000375218 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
UBR4-201ENST00000375218 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
UBR4-201ENST00000375218 TAF4BQ92750 862 aa10.83□□□□□ -0.68
UBR4-201ENST00000375218 RASSF7Q02833 373 aa10.83□□□□□ -0.68
UBR4-201ENST00000375218 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
UBR4-201ENST00000375218 ECEL1O95672 775 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
UBR4-201ENST00000375218 KIAA2012Q0VF49 1180 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 RGPD1P0DJD0 1748 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 PRSS47A8MTI9 375 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 XPCQ01831 940 aaPredicted RBP10.82□□□□□ -0.68
UBR4-201ENST00000375218 FLCNQ8NFG4 579 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 RANBP17Q9H2T7 1088 aaKnown RBP10.82□□□□□ -0.68
UBR4-201ENST00000375218 ANO2Q9NQ90 1003 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 USP25Q9UHP3 1055 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 CEP83Q9Y592 693 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 MAP2P11137 1827 aaKnown RBP10.82□□□□□ -0.68
UBR4-201ENST00000375218 CEBPAP49715 358 aaPredicted RBP10.82□□□□□ -0.68
UBR4-201ENST00000375218 SEPT2Q15019 361 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 CCDC93Q567U6 631 aa10.82□□□□□ -0.68
UBR4-201ENST00000375218 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.82□□□□□ -0.68
UBR4-201ENST00000375218 LTKP29376 864 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
UBR4-201ENST00000375218 SLC45A1Q9Y2W3 748 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 USP54Q70EL1 1684 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 IER2Q9BTL4 223 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 LZTS1Q9Y250 596 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 CEP170BQ9Y4F5 1589 aaPredicted RBP10.81□□□□□ -0.68
UBR4-201ENST00000375218 DLG5Q8TDM6 1919 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
UBR4-201ENST00000375218 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 TRIM64CA6NLI5 447 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 CCDC175P0C221 793 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 UBE4AQ14139 1066 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 ADD2P35612 726 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 PIK3C2AO00443 1686 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 SLC26A4O43511 780 aa10.8□□□□□ -0.68
UBR4-201ENST00000375218 LMOD1P29536 600 aaPredicted RBP10.79□□□□□ -0.68
UBR4-201ENST00000375218 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
UBR4-201ENST00000375218 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms