RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 GRIPAP1Q4V328 841 aa23.77■■□□□ 1.4
H2AFX-201ENST00000375167 CDC37L1Q7L3B6 337 aa23.77■■□□□ 1.4
H2AFX-201ENST00000375167 RNF186Q9NXI6 227 aa23.77■■□□□ 1.4
H2AFX-201ENST00000375167 ZC3H15Q8WU90 426 aaKnown RBP23.76■■□□□ 1.39
H2AFX-201ENST00000375167 PGAP2Q9UHJ9 254 aa23.76■■□□□ 1.39
H2AFX-201ENST00000375167 RGMBQ6NW40 437 aa23.75■■□□□ 1.39
H2AFX-201ENST00000375167 KIF23Q02241 960 aaPredicted RBP23.74■■□□□ 1.39
H2AFX-201ENST00000375167 PKN2Q16513 984 aaKnown RBP23.74■■□□□ 1.39
H2AFX-201ENST00000375167 ZNF790Q6PG37 636 aa23.74■■□□□ 1.39
H2AFX-201ENST00000375167 CCDC102AQ96A19 550 aa23.74■■□□□ 1.39
H2AFX-201ENST00000375167 FAM155AB1AL88 458 aaPredicted RBP23.73■■□□□ 1.39
H2AFX-201ENST00000375167 GTF2E1P29083 439 aaPredicted RBP23.73■■□□□ 1.39
H2AFX-201ENST00000375167 IL13P35225 146 aa23.73■■□□□ 1.39
H2AFX-201ENST00000375167 NIP7Q9Y221 180 aaKnown RBP eCLIP23.73■■□□□ 1.39
H2AFX-201ENST00000375167 CDHR2Q9BYE9 1310 aa23.73■■□□□ 1.39
H2AFX-201ENST00000375167 FAM177BA6PVY3 158 aa23.72■■□□□ 1.39
H2AFX-201ENST00000375167 FMNL2Q96PY5 1086 aa23.72■■□□□ 1.39
H2AFX-201ENST00000375167 NPC1L1Q9UHC9 1359 aa23.71■■□□□ 1.39
H2AFX-201ENST00000375167 PPIP5K2O43314 1243 aa23.71■■□□□ 1.39
H2AFX-201ENST00000375167 GMPSP49915 693 aaPredicted RBP23.71■■□□□ 1.39
H2AFX-201ENST00000375167 TEFQ10587 303 aa23.7■■□□□ 1.38
H2AFX-201ENST00000375167 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
H2AFX-201ENST00000375167 SIPA1L3O60292 1781 aaPredicted RBP23.69■■□□□ 1.38
H2AFX-201ENST00000375167 CRY2Q49AN0 593 aa23.69■■□□□ 1.38
H2AFX-201ENST00000375167 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
H2AFX-201ENST00000375167 ZNF157P51786 506 aaPredicted RBP23.68■■□□□ 1.38
H2AFX-201ENST00000375167 RPGRQ92834 1020 aaKnown RBP23.68■■□□□ 1.38
H2AFX-201ENST00000375167 FXR1P51114 621 aaKnown RBP eCLIP23.67■■□□□ 1.38
H2AFX-201ENST00000375167 CXCL9Q07325 125 aa23.67■■□□□ 1.38
H2AFX-201ENST00000375167 USP48Q86UV5 1035 aa23.67■■□□□ 1.38
H2AFX-201ENST00000375167 C2orf69Q8N8R5 385 aa23.67■■□□□ 1.38
H2AFX-201ENST00000375167 BCL2L13Q9BXK5 485 aa23.67■■□□□ 1.38
H2AFX-201ENST00000375167 GBA2Q9HCG7 927 aaPredicted RBP23.67■■□□□ 1.38
H2AFX-201ENST00000375167 HDAC9Q9UKV0 1011 aa23.67■■□□□ 1.38
H2AFX-201ENST00000375167 RGL2O15211 777 aa23.66■■□□□ 1.38
H2AFX-201ENST00000375167 HMOX1P09601 288 aa23.66■■□□□ 1.38
H2AFX-201ENST00000375167 AOC3Q16853 763 aa23.66■■□□□ 1.38
H2AFX-201ENST00000375167 MORC1Q86VD1 984 aa23.66■■□□□ 1.38
H2AFX-201ENST00000375167 ZNRF3Q9ULT6 936 aa23.66■■□□□ 1.38
H2AFX-201ENST00000375167 HIRAP54198 1017 aaPredicted RBP23.65■■□□□ 1.38
H2AFX-201ENST00000375167 TRPM4Q8TD43 1214 aa23.65■■□□□ 1.38
H2AFX-201ENST00000375167 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
H2AFX-201ENST00000375167 ABCC12Q96J65 1359 aa23.65■■□□□ 1.38
H2AFX-201ENST00000375167 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
H2AFX-201ENST00000375167 VPS33BQ9H267 617 aa23.65■■□□□ 1.38
H2AFX-201ENST00000375167 PPEF1O14829 653 aaPredicted RBP23.64■■□□□ 1.37
H2AFX-201ENST00000375167 CSRNP1Q96S65 589 aa23.64■■□□□ 1.37
H2AFX-201ENST00000375167 TMX4Q9H1E5 349 aaPredicted RBP23.64■■□□□ 1.37
H2AFX-201ENST00000375167 RIC1Q4ADV7 1423 aa23.63■■□□□ 1.37
H2AFX-201ENST00000375167 SLC10A3P09131 477 aa23.63■■□□□ 1.37
H2AFX-201ENST00000375167 HOXA10P31260 410 aaPredicted RBP23.63■■□□□ 1.37
H2AFX-201ENST00000375167 REM2Q8IYK8 340 aaPredicted RBP23.63■■□□□ 1.37
H2AFX-201ENST00000375167 NYXQ9GZU5 481 aa23.63■■□□□ 1.37
H2AFX-201ENST00000375167 KIF7Q2M1P5 1343 aa23.62■■□□□ 1.37
H2AFX-201ENST00000375167 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
H2AFX-201ENST00000375167 H7C1D1 291 aa23.6■■□□□ 1.37
H2AFX-201ENST00000375167 TNIP1Q15025 636 aa23.6■■□□□ 1.37
H2AFX-201ENST00000375167 KRT26Q7Z3Y9 468 aa23.6■■□□□ 1.37
H2AFX-201ENST00000375167 RBM17Q96I25 401 aaKnown RBP23.6■■□□□ 1.37
H2AFX-201ENST00000375167 FBXO46Q6PJ61 603 aaPredicted RBP23.59■■□□□ 1.37
H2AFX-201ENST00000375167 DLK2Q6UY11 383 aa23.59■■□□□ 1.37
H2AFX-201ENST00000375167 SUPT20HQ8NEM7 779 aa23.59■■□□□ 1.37
H2AFX-201ENST00000375167 CNOT7Q9UIV1 285 aaKnown RBP23.59■■□□□ 1.37
H2AFX-201ENST00000375167 USP16Q9Y5T5 823 aa23.59■■□□□ 1.37
H2AFX-201ENST00000375167 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
H2AFX-201ENST00000375167 CRAMP1Q96RY5 1269 aa23.58■■□□□ 1.37
H2AFX-201ENST00000375167 SLC51AQ86UW1 340 aa23.57■■□□□ 1.36
H2AFX-201ENST00000375167 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
H2AFX-201ENST00000375167 ZNF296Q8WUU4 475 aaPredicted RBP23.57■■□□□ 1.36
H2AFX-201ENST00000375167 DLL1O00548 723 aa23.56■■□□□ 1.36
H2AFX-201ENST00000375167 RAD17O75943 681 aa23.56■■□□□ 1.36
H2AFX-201ENST00000375167 MICALL2Q8IY33 904 aa23.56■■□□□ 1.36
H2AFX-201ENST00000375167 POLR2AP24928 1970 aaKnown RBP23.56■■□□□ 1.36
H2AFX-201ENST00000375167 GNAT3A8MTJ3 354 aa23.55■■□□□ 1.36
H2AFX-201ENST00000375167 HLFQ16534 295 aa23.54■■□□□ 1.36
H2AFX-201ENST00000375167 SHTN1A0MZ66 631 aa23.53■■□□□ 1.36
H2AFX-201ENST00000375167 BTBD11A6QL63 1104 aa23.53■■□□□ 1.36
H2AFX-201ENST00000375167 DCPSQ96C86 337 aaKnown RBP23.53■■□□□ 1.36
H2AFX-201ENST00000375167 ADM5C9JUS6 153 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 KCNQ3O43525 872 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 PANK3Q9H999 370 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 ATP6V0A2Q9Y487 856 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
H2AFX-201ENST00000375167 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
H2AFX-201ENST00000375167 RASAL3Q86YV0 1011 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
H2AFX-201ENST00000375167 RTFDC1Q9BY42 306 aaPredicted RBP23.52■■□□□ 1.36
H2AFX-201ENST00000375167 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
H2AFX-201ENST00000375167 KIAA2012Q0VF49 1180 aa23.51■■□□□ 1.35
H2AFX-201ENST00000375167 NUP98P52948 1817 aa23.5■■□□□ 1.35
H2AFX-201ENST00000375167 TBC1D8O95759 1140 aa23.5■■□□□ 1.35
H2AFX-201ENST00000375167 DPP8Q6V1X1 898 aaPredicted RBP23.5■■□□□ 1.35
H2AFX-201ENST00000375167 SAMD7Q7Z3H4 446 aa23.5■■□□□ 1.35
H2AFX-201ENST00000375167 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
H2AFX-201ENST00000375167 TBC1D10BQ4KMP7 808 aaPredicted RBP23.49■■□□□ 1.35
H2AFX-201ENST00000375167 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
H2AFX-201ENST00000375167 RBBP6Q7Z6E9 1792 aaKnown RBP23.49■■□□□ 1.35
H2AFX-201ENST00000375167 CEMIPQ8WUJ3 1361 aa23.48■■□□□ 1.35
H2AFX-201ENST00000375167 NOM1Q5C9Z4 860 aaKnown RBP23.48■■□□□ 1.35
H2AFX-201ENST00000375167 DPF2Q92785 391 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms