RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 GLIS2Q9BZE0 524 aaPredicted RBP12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 ZNF408Q9H9D4 720 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 AKAP11Q9UKA4 1901 aa12.73□□□□□ -0.37
HLA-DOA-202ENST00000374813 TRPA1O75762 1119 aa12.73□□□□□ -0.37
HLA-DOA-202ENST00000374813 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
HLA-DOA-202ENST00000374813 MORC1Q86VD1 984 aa12.73□□□□□ -0.37
HLA-DOA-202ENST00000374813 NIP7Q9Y221 180 aaKnown RBP eCLIP12.73□□□□□ -0.37
HLA-DOA-202ENST00000374813 HABP4Q5JVS0 413 aaKnown RBP12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 RGMBQ6NW40 437 aa12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 RNF186Q9NXI6 227 aa12.72□□□□□ -0.37
HLA-DOA-202ENST00000374813 BCORQ6W2J9 1755 aa12.71□□□□□ -0.37
HLA-DOA-202ENST00000374813 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
HLA-DOA-202ENST00000374813 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
HLA-DOA-202ENST00000374813 A0A0C4DFX4 3053 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 HMOX1P09601 288 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 CXCL9Q07325 125 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 BCL2L13Q9BXK5 485 aa12.69□□□□□ -0.38
HLA-DOA-202ENST00000374813 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 FAM155AB1AL88 458 aaPredicted RBP12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 H7C1D1 291 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 TNIP1Q15025 636 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
HLA-DOA-202ENST00000374813 COL4A5P29400 1685 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 CRAMP1Q96RY5 1269 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 PANK3Q9H999 370 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
HLA-DOA-202ENST00000374813 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
HLA-DOA-202ENST00000374813 AOC3Q16853 763 aa12.66□□□□□ -0.38
HLA-DOA-202ENST00000374813 CNOT7Q9UIV1 285 aaKnown RBP12.66□□□□□ -0.38
HLA-DOA-202ENST00000374813 CENPFP49454 3210 aa12.66□□□□□ -0.38
HLA-DOA-202ENST00000374813 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
HLA-DOA-202ENST00000374813 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
HLA-DOA-202ENST00000374813 GAS2L2Q8NHY3 880 aa12.65□□□□□ -0.38
HLA-DOA-202ENST00000374813 SZT2Q5T011 3432 aa12.65□□□□□ -0.39
HLA-DOA-202ENST00000374813 POLR2AP24928 1970 aaKnown RBP12.64□□□□□ -0.39
HLA-DOA-202ENST00000374813 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
HLA-DOA-202ENST00000374813 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
HLA-DOA-202ENST00000374813 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 SLC10A3P09131 477 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 HLFQ16534 295 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 DCPSQ96C86 337 aaKnown RBP12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
HLA-DOA-202ENST00000374813 ERVV-1B6SEH8 477 aa12.62□□□□□ -0.39
HLA-DOA-202ENST00000374813 DIAPH1O60610 1272 aaKnown RBP12.62□□□□□ -0.39
HLA-DOA-202ENST00000374813 FXR1P51114 621 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLA-DOA-202ENST00000374813 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOA-202ENST00000374813 DPF2Q92785 391 aa12.62□□□□□ -0.39
HLA-DOA-202ENST00000374813 KCNQ3O43525 872 aa12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 RAD17O75943 681 aa12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 KIAA2012Q0VF49 1180 aa12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
HLA-DOA-202ENST00000374813 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 NBPF26B4DH59 902 aa12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 BBOX1O75936 387 aa12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 NOM1Q5C9Z4 860 aaKnown RBP12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 BRCA2P51587 3418 aa12.6□□□□□ -0.39
HLA-DOA-202ENST00000374813 INTS3Q68E01 1043 aaKnown RBP12.59□□□□□ -0.39
HLA-DOA-202ENST00000374813 MPNDQ8N594 471 aa12.59□□□□□ -0.39
HLA-DOA-202ENST00000374813 KIAA0100Q14667 2235 aaKnown RBP12.58□□□□□ -0.39
HLA-DOA-202ENST00000374813 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
HLA-DOA-202ENST00000374813 FKBP1BP68106 108 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms