RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 SH3TC1Q8TE82 1336 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
PFDN6-202ENST00000374607 TGFB2P61812 414 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 TRIM28Q13263 835 aaKnown RBP19.3■□□□□ 0.68
PFDN6-202ENST00000374607 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
PFDN6-202ENST00000374607 ERFEQ4G0M1 354 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 RTL5Q5HYW3 569 aaPredicted RBP19.3■□□□□ 0.68
PFDN6-202ENST00000374607 LINS1Q8NG48 757 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
PFDN6-202ENST00000374607 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
PFDN6-202ENST00000374607 C10orf71Q711Q0 1435 aa19.29■□□□□ 0.68
PFDN6-202ENST00000374607 H0YIN7 160 aa19.29■□□□□ 0.68
PFDN6-202ENST00000374607 NTSR2O95665 410 aa19.29■□□□□ 0.68
PFDN6-202ENST00000374607 HSP90B1P14625 803 aaKnown RBP19.29■□□□□ 0.68
PFDN6-202ENST00000374607 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
PFDN6-202ENST00000374607 SRCIN1Q9C0H9 1055 aa19.29■□□□□ 0.68
PFDN6-202ENST00000374607 IBTKQ9P2D0 1353 aaPredicted RBP19.29■□□□□ 0.68
PFDN6-202ENST00000374607 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
PFDN6-202ENST00000374607 ZKSCAN2Q63HK3 967 aa19.28■□□□□ 0.68
PFDN6-202ENST00000374607 C2CD5Q86YS7 1000 aa19.28■□□□□ 0.68
PFDN6-202ENST00000374607 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
PFDN6-202ENST00000374607 PDZRN3Q9UPQ7 1066 aa19.28■□□□□ 0.68
PFDN6-202ENST00000374607 A0A0G2JLW4 131 aa19.27■□□□□ 0.68
PFDN6-202ENST00000374607 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
PFDN6-202ENST00000374607 ZBTB38Q8NAP3 1195 aaPredicted RBP19.27■□□□□ 0.68
PFDN6-202ENST00000374607 NLGN2Q8NFZ4 835 aa19.27■□□□□ 0.68
PFDN6-202ENST00000374607 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.68
PFDN6-202ENST00000374607 NLRP3Q96P20 1036 aa19.27■□□□□ 0.68
PFDN6-202ENST00000374607 C9orf78Q9NZ63 289 aaPredicted RBP19.27■□□□□ 0.68
PFDN6-202ENST00000374607 NRXN2Q9P2S2 1712 aa19.26■□□□□ 0.67
PFDN6-202ENST00000374607 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
PFDN6-202ENST00000374607 FTSJ3Q8IY81 847 aaKnown RBP19.26■□□□□ 0.67
PFDN6-202ENST00000374607 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.26■□□□□ 0.67
PFDN6-202ENST00000374607 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.673e-9■□□□□ 10.4
PFDN6-202ENST00000374607 ALDH1L1O75891 902 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
PFDN6-202ENST00000374607 HCLS1P14317 486 aaPredicted RBP19.25■□□□□ 0.67
PFDN6-202ENST00000374607 DPEP1P16444 411 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 CHRNA5P30532 468 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 CCT4P50991 539 aaKnown RBP19.25■□□□□ 0.67
PFDN6-202ENST00000374607 GCKRQ14397 625 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
PFDN6-202ENST00000374607 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
PFDN6-202ENST00000374607 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
PFDN6-202ENST00000374607 UBE3BQ7Z3V4 1068 aa19.24■□□□□ 0.67
PFDN6-202ENST00000374607 JARID2Q92833 1246 aaPredicted RBP19.24■□□□□ 0.67
PFDN6-202ENST00000374607 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
PFDN6-202ENST00000374607 MS4A1P11836 297 aa19.23■□□□□ 0.67
PFDN6-202ENST00000374607 SYNE4Q8N205 404 aa19.23■□□□□ 0.67
PFDN6-202ENST00000374607 PIM2Q9P1W9 311 aa19.23■□□□□ 0.67
PFDN6-202ENST00000374607 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
PFDN6-202ENST00000374607 TRIM27P14373 513 aa19.22■□□□□ 0.67
PFDN6-202ENST00000374607 GPR162Q16538 588 aa19.22■□□□□ 0.67
PFDN6-202ENST00000374607 SLC10A5Q5PT55 438 aa19.22■□□□□ 0.67
PFDN6-202ENST00000374607 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
PFDN6-202ENST00000374607 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
PFDN6-202ENST00000374607 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
PFDN6-202ENST00000374607 PXDNLA1KZ92 1463 aa19.21■□□□□ 0.67
PFDN6-202ENST00000374607 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
PFDN6-202ENST00000374607 GRM8O00222 908 aa19.2■□□□□ 0.66
PFDN6-202ENST00000374607 PDE8AO60658 829 aa19.2■□□□□ 0.66
PFDN6-202ENST00000374607 NPR1P16066 1061 aa19.2■□□□□ 0.66
PFDN6-202ENST00000374607 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
PFDN6-202ENST00000374607 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
PFDN6-202ENST00000374607 BCS1LQ9Y276 419 aa19.2■□□□□ 0.66
PFDN6-202ENST00000374607 H7C1W4 665 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 SRGNP10124 158 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 ALDH1B1P30837 517 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
PFDN6-202ENST00000374607 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
PFDN6-202ENST00000374607 STYK1Q6J9G0 422 aa19.18■□□□□ 0.66
PFDN6-202ENST00000374607 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
PFDN6-202ENST00000374607 ANKRD31Q8N7Z5 1873 aa19.18■□□□□ 0.66
PFDN6-202ENST00000374607 RIC1Q4ADV7 1423 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 PLIN1O60240 522 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 ITPRIPQ8IWB1 547 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 TMX4Q9H1E5 349 aaPredicted RBP19.17■□□□□ 0.66
PFDN6-202ENST00000374607 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 ABCC4O15439 1325 aa19.17■□□□□ 0.66
PFDN6-202ENST00000374607 KLRG2A4D1S0 409 aaPredicted RBP19.16■□□□□ 0.66
PFDN6-202ENST00000374607 KCNA3P22001 575 aa19.16■□□□□ 0.66
PFDN6-202ENST00000374607 INTS3Q68E01 1043 aaKnown RBP19.16■□□□□ 0.66
PFDN6-202ENST00000374607 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
PFDN6-202ENST00000374607 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
PFDN6-202ENST00000374607 TNNQ9UQP3 1299 aa19.16■□□□□ 0.66
PFDN6-202ENST00000374607 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
PFDN6-202ENST00000374607 CTSWP56202 376 aa19.15■□□□□ 0.66
PFDN6-202ENST00000374607 CRY2Q49AN0 593 aa19.15■□□□□ 0.66
PFDN6-202ENST00000374607 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
PFDN6-202ENST00000374607 TMEM57Q8N5G2 664 aa19.15■□□□□ 0.66
PFDN6-202ENST00000374607 TNRC6CQ9HCJ0 1690 aaKnown RBP19.14■□□□□ 0.66
PFDN6-202ENST00000374607 GNAI3P08754 354 aa19.13■□□□□ 0.65
PFDN6-202ENST00000374607 NBPF7P0C2Y1 421 aaPredicted RBP19.13■□□□□ 0.65
PFDN6-202ENST00000374607 YY1P25490 414 aa19.13■□□□□ 0.65
PFDN6-202ENST00000374607 SF3B3Q15393 1217 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms