RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 SIRT2Q8IXJ6 389 aa12.09□□□□□ -0.47
PTPN20-202ENST00000374339 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
PTPN20-202ENST00000374339 TNS1Q9HBL0 1735 aaKnown RBP12.09□□□□□ -0.47
PTPN20-202ENST00000374339 SCN7AQ01118 1682 aa12.08□□□□□ -0.48
PTPN20-202ENST00000374339 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
PTPN20-202ENST00000374339 MTX1Q13505 466 aa12.08□□□□□ -0.48
PTPN20-202ENST00000374339 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
PTPN20-202ENST00000374339 GNPATO15228 680 aa12.07□□□□□ -0.48
PTPN20-202ENST00000374339 CLEC4GQ6UXB4 293 aa12.07□□□□□ -0.48
PTPN20-202ENST00000374339 AK7Q96M32 723 aa12.07□□□□□ -0.48
PTPN20-202ENST00000374339 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-202ENST00000374339 TBC1D2BQ9UPU7 963 aa12.07□□□□□ -0.48
PTPN20-202ENST00000374339 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
PTPN20-202ENST00000374339 H7C1W4 665 aa12.06□□□□□ -0.48
PTPN20-202ENST00000374339 KCNQ4P56696 695 aa12.06□□□□□ -0.48
PTPN20-202ENST00000374339 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
PTPN20-202ENST00000374339 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
PTPN20-202ENST00000374339 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
PTPN20-202ENST00000374339 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 APBA3O96018 575 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 PCCAP05165 728 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-202ENST00000374339 NUCB1Q02818 461 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 HLFQ16534 295 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 PARP10Q53GL7 1025 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 C4AP0C0L4 1744 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 EP400Q96L91 3159 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 ZPR1O75312 459 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
PTPN20-202ENST00000374339 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 ZNF34Q8IZ26 560 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 ZBTB38Q8NAP3 1195 aaPredicted RBP12.05□□□□□ -0.48
PTPN20-202ENST00000374339 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
PTPN20-202ENST00000374339 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
PTPN20-202ENST00000374339 CDHR2Q9BYE9 1310 aa12.04□□□□□ -0.48
PTPN20-202ENST00000374339 CASP7P55210 303 aa12.04□□□□□ -0.48
PTPN20-202ENST00000374339 TRAPPC3LQ5T215 181 aa12.04□□□□□ -0.48
PTPN20-202ENST00000374339 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
PTPN20-202ENST00000374339 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
PTPN20-202ENST00000374339 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 GPTP24298 496 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 SSFA2P28290 1259 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 RFC4P35249 363 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 RABL6Q3YEC7 729 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-202ENST00000374339 ANKRD45Q5TZF3 282 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 TRMT112Q9UI30 125 aaKnown RBP12.03□□□□□ -0.48
PTPN20-202ENST00000374339 MYH3P11055 1940 aa12.03□□□□□ -0.48
PTPN20-202ENST00000374339 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.49
PTPN20-202ENST00000374339 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-202ENST00000374339 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTPN20-202ENST00000374339 LAMB2P55268 1798 aa12.02□□□□□ -0.49
PTPN20-202ENST00000374339 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
PTPN20-202ENST00000374339 RGS3P49796 1198 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 PROM2Q8N271 834 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
PTPN20-202ENST00000374339 UTP14AQ9BVJ6 771 aaKnown RBP12.01□□□□□ -0.49
PTPN20-202ENST00000374339 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 LRRCC1Q9C099 1032 aa12.01□□□□□ -0.49
PTPN20-202ENST00000374339 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
PTPN20-202ENST00000374339 SH3TC1Q8TE82 1336 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 HAX1O00165 279 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
PTPN20-202ENST00000374339 FOXO4P98177 505 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 FAM89AQ96GI7 184 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 LNPKQ9C0E8 428 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 EXOC6BQ9Y2D4 811 aa12□□□□□ -0.49
PTPN20-202ENST00000374339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
PTPN20-202ENST00000374339 PHF14O94880 888 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN20-202ENST00000374339 OS9Q13438 667 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-202ENST00000374339 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-202ENST00000374339 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 LMBR1LQ6UX01 489 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 JARID2Q92833 1246 aaPredicted RBP11.99□□□□□ -0.49
PTPN20-202ENST00000374339 KIF1BPQ96EK5 621 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 SETDB2Q96T68 719 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
PTPN20-202ENST00000374339 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
PTPN20-202ENST00000374339 PDE8AO60658 829 aa11.98□□□□□ -0.49
PTPN20-202ENST00000374339 BAG6P46379 1132 aa11.98□□□□□ -0.49
PTPN20-202ENST00000374339 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPN20-202ENST00000374339 SUSD4Q5VX71 490 aa11.98□□□□□ -0.49
PTPN20-202ENST00000374339 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms