RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-205ENST00000373568 RNF123Q5XPI4 1314 aa16.89■□□□□ 0.29
HDAC8-205ENST00000373568 CHD4Q14839 1912 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 ATP5J2-PTCD1G3V325 749 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
HDAC8-205ENST00000373568 GPR162Q16538 588 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
HDAC8-205ENST00000373568 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
HDAC8-205ENST00000373568 SRGNP10124 158 aa16.87■□□□□ 0.29
HDAC8-205ENST00000373568 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
HDAC8-205ENST00000373568 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
HDAC8-205ENST00000373568 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
HDAC8-205ENST00000373568 MYD88Q99836 296 aa16.87■□□□□ 0.29
HDAC8-205ENST00000373568 PIM2Q9P1W9 311 aa16.87■□□□□ 0.29
HDAC8-205ENST00000373568 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 H0YIN7 160 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 NPHP1O15259 732 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
HDAC8-205ENST00000373568 CRY2Q49AN0 593 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
HDAC8-205ENST00000373568 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
HDAC8-205ENST00000373568 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
HDAC8-205ENST00000373568 FKBP5Q13451 457 aaPredicted RBP16.85■□□□□ 0.29
HDAC8-205ENST00000373568 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
HDAC8-205ENST00000373568 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
HDAC8-205ENST00000373568 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
HDAC8-205ENST00000373568 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
HDAC8-205ENST00000373568 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
HDAC8-205ENST00000373568 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
HDAC8-205ENST00000373568 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
HDAC8-205ENST00000373568 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
HDAC8-205ENST00000373568 GRIN3BO60391 1043 aa16.83■□□□□ 0.28
HDAC8-205ENST00000373568 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
HDAC8-205ENST00000373568 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
HDAC8-205ENST00000373568 MASTLQ96GX5 879 aa16.83■□□□□ 0.28
HDAC8-205ENST00000373568 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
HDAC8-205ENST00000373568 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
HDAC8-205ENST00000373568 F6X3S4 739 aa16.82■□□□□ 0.28
HDAC8-205ENST00000373568 NPR1P16066 1061 aa16.82■□□□□ 0.28
HDAC8-205ENST00000373568 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
HDAC8-205ENST00000373568 FAM89AQ96GI7 184 aa16.82■□□□□ 0.28
HDAC8-205ENST00000373568 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
HDAC8-205ENST00000373568 COL4A1P02462 1669 aa16.81■□□□□ 0.28
HDAC8-205ENST00000373568 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-205ENST00000373568 HOXA10P31260 410 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-205ENST00000373568 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-205ENST00000373568 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-205ENST00000373568 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-205ENST00000373568 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
HDAC8-205ENST00000373568 MYH3P11055 1940 aa16.8■□□□□ 0.28
HDAC8-205ENST00000373568 SBF1O95248 1867 aa16.8■□□□□ 0.28
HDAC8-205ENST00000373568 TAF1P21675 1872 aa16.8■□□□□ 0.28
HDAC8-205ENST00000373568 PCCAP05165 728 aaPredicted RBP16.8■□□□□ 0.28
HDAC8-205ENST00000373568 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
HDAC8-205ENST00000373568 BEND3Q5T5X7 828 aa16.8■□□□□ 0.28
HDAC8-205ENST00000373568 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
HDAC8-205ENST00000373568 SNED1Q8TER0 1413 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 PTPRCP08575 1304 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
HDAC8-205ENST00000373568 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 NLRP3Q96P20 1036 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
HDAC8-205ENST00000373568 CDHR2Q9BYE9 1310 aa16.78■□□□□ 0.28
HDAC8-205ENST00000373568 GCKRQ14397 625 aa16.78■□□□□ 0.28
HDAC8-205ENST00000373568 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
HDAC8-205ENST00000373568 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
HDAC8-205ENST00000373568 H7C1W4 665 aa16.77■□□□□ 0.28
HDAC8-205ENST00000373568 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.28
HDAC8-205ENST00000373568 CASP7P55210 303 aa16.77■□□□□ 0.28
HDAC8-205ENST00000373568 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
HDAC8-205ENST00000373568 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
HDAC8-205ENST00000373568 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
HDAC8-205ENST00000373568 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
HDAC8-205ENST00000373568 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
HDAC8-205ENST00000373568 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
HDAC8-205ENST00000373568 ABCC4O15439 1325 aa16.75■□□□□ 0.27
HDAC8-205ENST00000373568 NFKBIEO00221 500 aa16.75■□□□□ 0.27
HDAC8-205ENST00000373568 C21orf2O43822 256 aa16.75■□□□□ 0.27
HDAC8-205ENST00000373568 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
HDAC8-205ENST00000373568 PRELPP51888 382 aa16.74■□□□□ 0.27
HDAC8-205ENST00000373568 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
HDAC8-205ENST00000373568 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
HDAC8-205ENST00000373568 DICER1Q9UPY3 1922 aaKnown RBP16.73■□□□□ 0.27
HDAC8-205ENST00000373568 PDE8AO60658 829 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 RASSF7Q02833 373 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-205ENST00000373568 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
HDAC8-205ENST00000373568 TIAM2Q8IVF5 1701 aa16.73■□□□□ 0.27
HDAC8-205ENST00000373568 BCAR3O75815 825 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms