RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 ZNF213O14771 459 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 ZBTB7BO15156 539 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 STIM1Q13586 685 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 ARHGAP29Q52LW3 1261 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 NAPBQ9H115 298 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 DEF6Q9H4E7 631 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 MAP3K4Q9Y6R4 1608 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
CSMD2-204ENST00000373380 AKAP2Q9Y2D5 859 aa12.69□□□□□ -0.38
CSMD2-204ENST00000373380 EFCAB6Q5THR3 1501 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 GPTP24298 496 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
CSMD2-204ENST00000373380 TANGO6Q9C0B7 1094 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
CSMD2-204ENST00000373380 RBM8AQ9Y5S9 174 aaKnown RBP12.68□□□□□ -0.38
CSMD2-204ENST00000373380 STARD3NLO95772 234 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 CCDC144CPQ8IYA2 1237 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
CSMD2-204ENST00000373380 EPB41L2O43491 1005 aaKnown RBP12.67□□□□□ -0.38
CSMD2-204ENST00000373380 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 ZFYVE27Q5T4F4 411 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 ORC3Q9UBD5 711 aaPredicted RBP12.67□□□□□ -0.38
CSMD2-204ENST00000373380 MCM5P33992 734 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 PLCD4Q9BRC7 762 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
CSMD2-204ENST00000373380 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 TOP1P11387 765 aaKnown RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 WASF1Q92558 559 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 USP26Q9BXU7 913 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 CDR1P51861 262 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 ANAPC15P60006 121 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 TAF3Q5VWG9 929 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 TMX1Q9H3N1 280 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 CTAGE5O15320 804 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 DTNBO60941 627 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 G2E3Q7L622 706 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 MICU3Q86XE3 530 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 CCDC191Q8NCU4 936 aa12.66□□□□□ -0.38
CSMD2-204ENST00000373380 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
CSMD2-204ENST00000373380 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
CSMD2-204ENST00000373380 ERLIN1O75477 346 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 CPA1P15085 419 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
CSMD2-204ENST00000373380 FAM193AP78312 1265 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 TMC6Q7Z403 805 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
CSMD2-204ENST00000373380 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
CSMD2-204ENST00000373380 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
CSMD2-204ENST00000373380 CHRNA2Q15822 529 aa12.65□□□□□ -0.39
CSMD2-204ENST00000373380 CCDC181Q5TID7 509 aa12.65□□□□□ -0.39
CSMD2-204ENST00000373380 CCDC102AQ96A19 550 aa12.65□□□□□ -0.39
CSMD2-204ENST00000373380 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.39
CSMD2-204ENST00000373380 CEP152O94986 1710 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
CSMD2-204ENST00000373380 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSMD2-204ENST00000373380 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 KIF2AO00139 706 aaPredicted RBP12.64□□□□□ -0.39
CSMD2-204ENST00000373380 AK2P54819 239 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 NEO1Q92859 1461 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 F13A1P00488 732 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
CSMD2-204ENST00000373380 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
CSMD2-204ENST00000373380 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
CSMD2-204ENST00000373380 GOLGA8AA7E2F4 631 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 CHMLP26374 656 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
CSMD2-204ENST00000373380 ANO6Q4KMQ2 910 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
CSMD2-204ENST00000373380 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 PPP4R3BQ5MIZ7 849 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 PHAXQ9H814 394 aaKnown RBP12.63□□□□□ -0.39
CSMD2-204ENST00000373380 GRM8O00222 908 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms