RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.22
HDLBP-202ENST00000373292 NUP98P52948 1817 aa13.71□□□□□ -0.22
HDLBP-202ENST00000373292 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-202ENST00000373292 TRIM6-TRIM34B2RNG4 842 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 ATP6V1AP38606 617 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 ERBB4Q15303 1308 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 EDC3Q96F86 508 aaKnown RBP13.7□□□□□ -0.22
HDLBP-202ENST00000373292 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 SIK1P57059 783 aa13.7□□□□□ -0.22
HDLBP-202ENST00000373292 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
HDLBP-202ENST00000373292 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
HDLBP-202ENST00000373292 RBM25P49756 843 aaKnown RBP13.69□□□□□ -0.22
HDLBP-202ENST00000373292 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
HDLBP-202ENST00000373292 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-202ENST00000373292 STARD3NLO95772 234 aa13.69□□□□□ -0.22
HDLBP-202ENST00000373292 CRKLP46109 303 aaKnown RBP13.69□□□□□ -0.22
HDLBP-202ENST00000373292 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
HDLBP-202ENST00000373292 CHMP3Q9Y3E7 222 aa13.69□□□□□ -0.22
HDLBP-202ENST00000373292 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 TFCP2Q12800 502 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 AACSQ86V21 672 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
HDLBP-202ENST00000373292 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-202ENST00000373292 PALLDQ8WX93 1383 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 CHMLP26374 656 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 ATG9AQ7Z3C6 839 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
HDLBP-202ENST00000373292 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 AFF2P51816 1311 aa13.67□□□□□ -0.22
HDLBP-202ENST00000373292 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 CDCA7Q9BWT1 371 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-202ENST00000373292 COL4A1P02462 1669 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
HDLBP-202ENST00000373292 EIF5P55010 431 aaKnown RBP13.66□□□□□ -0.22
HDLBP-202ENST00000373292 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
HDLBP-202ENST00000373292 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
HDLBP-202ENST00000373292 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
HDLBP-202ENST00000373292 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
HDLBP-202ENST00000373292 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.225e-8■■□□□ 14
HDLBP-202ENST00000373292 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-202ENST00000373292 TIMM10P62072 90 aa13.65□□□□□ -0.23
HDLBP-202ENST00000373292 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.23
HDLBP-202ENST00000373292 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-202ENST00000373292 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-202ENST00000373292 BOLA2Q9H3K6 86 aa13.64□□□□□ -0.23
HDLBP-202ENST00000373292 THSD7AQ9UPZ6 1657 aa13.64□□□□□ -0.23
HDLBP-202ENST00000373292 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
HDLBP-202ENST00000373292 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
HDLBP-202ENST00000373292 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 BTAF1O14981 1849 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 TAF1P21675 1872 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
HDLBP-202ENST00000373292 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
HDLBP-202ENST00000373292 COL5A3P25940 1745 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-202ENST00000373292 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
HDLBP-202ENST00000373292 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
HDLBP-202ENST00000373292 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-202ENST00000373292 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 GREM2Q9H772 168 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 SNAP23O00161 211 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
HDLBP-202ENST00000373292 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 COL15A1P39059 1388 aa13.62□□□□□ -0.23
HDLBP-202ENST00000373292 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-202ENST00000373292 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-202ENST00000373292 ECHDC1Q9NTX5 307 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 FAM227BQ96M60 508 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 ERC2O15083 957 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
HDLBP-202ENST00000373292 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 ZNF34Q8IZ26 560 aa13.61□□□□□ -0.23
HDLBP-202ENST00000373292 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
HDLBP-202ENST00000373292 WTIPA6NIX2 430 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-202ENST00000373292 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-202ENST00000373292 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
HDLBP-202ENST00000373292 DTNBO60941 627 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 RREB1Q92766 1687 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 CSF1RP07333 972 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 ADORA1P30542 326 aa13.59□□□□□ -0.23
HDLBP-202ENST00000373292 PTH1RQ03431 593 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms