RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
LCN2-202ENST00000372998 CNPY2Q9Y2B0 182 aa12.95□□□□□ -0.34
LCN2-202ENST00000372998 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
LCN2-202ENST00000372998 JCADQ9P266 1359 aa12.94□□□□□ -0.34
LCN2-202ENST00000372998 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
LCN2-202ENST00000372998 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
LCN2-202ENST00000372998 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 ADCY5O95622 1261 aa12.94□□□□□ -0.34
LCN2-202ENST00000372998 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
LCN2-202ENST00000372998 DNTTIP2Q5QJE6 756 aaKnown RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 ZSCAN16Q9H4T2 348 aaPredicted RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
LCN2-202ENST00000372998 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
LCN2-202ENST00000372998 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 CTAGE5O15320 804 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
LCN2-202ENST00000372998 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
LCN2-202ENST00000372998 ARHGEF25Q86VW2 580 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 MYRIPQ8NFW9 859 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
LCN2-202ENST00000372998 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
LCN2-202ENST00000372998 FIBPO43427 364 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
LCN2-202ENST00000372998 RPS6KB1P23443 525 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
LCN2-202ENST00000372998 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
LCN2-202ENST00000372998 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
LCN2-202ENST00000372998 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
LCN2-202ENST00000372998 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
LCN2-202ENST00000372998 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 VPS37CA5D8V6 355 aaPredicted RBP12.91□□□□□ -0.34
LCN2-202ENST00000372998 SLC27A2O14975 620 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 ATP5JP18859 108 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 COPRSQ9NQ92 184 aa12.91□□□□□ -0.34
LCN2-202ENST00000372998 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
LCN2-202ENST00000372998 GCP02774 474 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 PTH1RQ03431 593 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
LCN2-202ENST00000372998 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 IL25Q9H293 177 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
LCN2-202ENST00000372998 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
LCN2-202ENST00000372998 NEMFO60524 1076 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
LCN2-202ENST00000372998 DNM1Q05193 864 aaKnown RBP12.89□□□□□ -0.35
LCN2-202ENST00000372998 ME3Q16798 604 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
LCN2-202ENST00000372998 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 GPR108Q9NPR9 543 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
LCN2-202ENST00000372998 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
LCN2-202ENST00000372998 SASH1O94885 1247 aa12.88□□□□□ -0.35
LCN2-202ENST00000372998 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
LCN2-202ENST00000372998 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
LCN2-202ENST00000372998 BICC1Q9H694 974 aaKnown RBP12.88□□□□□ -0.35
LCN2-202ENST00000372998 CDC25BP30305 580 aa12.87□□□□□ -0.35
LCN2-202ENST00000372998 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
LCN2-202ENST00000372998 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
LCN2-202ENST00000372998 CLSTN2Q9H4D0 955 aa12.87□□□□□ -0.35
LCN2-202ENST00000372998 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
LCN2-202ENST00000372998 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 H3BQV1 296 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
LCN2-202ENST00000372998 GCKRQ14397 625 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 SYCP1Q15431 976 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
LCN2-202ENST00000372998 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 ZNF396Q96N95 335 aaPredicted RBP12.86□□□□□ -0.35
LCN2-202ENST00000372998 NEK1Q96PY6 1258 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
LCN2-202ENST00000372998 NPHP4O75161 1426 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms