RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM53-204ENST00000372243 UBN2Q6ZU65 1347 aa19.94■□□□□ 0.78
TMEM53-204ENST00000372243 MEIS3Q99687 375 aa19.94■□□□□ 0.78
TMEM53-204ENST00000372243 COL24A1Q17RW2 1714 aa19.93■□□□□ 0.78
TMEM53-204ENST00000372243 GPTP24298 496 aa19.93■□□□□ 0.78
TMEM53-204ENST00000372243 HDAC5Q9UQL6 1122 aa19.93■□□□□ 0.78
TMEM53-204ENST00000372243 H7C1W4 665 aa19.92■□□□□ 0.78
TMEM53-204ENST00000372243 TBC1D9BQ66K14 1250 aa19.92■□□□□ 0.78
TMEM53-204ENST00000372243 NLGN1Q8N2Q7 840 aa19.92■□□□□ 0.78
TMEM53-204ENST00000372243 MSH5O43196 834 aa19.91■□□□□ 0.78
TMEM53-204ENST00000372243 NBPF7P0C2Y1 421 aaPredicted RBP19.91■□□□□ 0.78
TMEM53-204ENST00000372243 UBTFL1P0CB47 393 aaPredicted RBP19.91■□□□□ 0.78
TMEM53-204ENST00000372243 PPP1R42Q7Z4L9 355 aa19.91■□□□□ 0.78
TMEM53-204ENST00000372243 SETDB2Q96T68 719 aa19.91■□□□□ 0.78
TMEM53-204ENST00000372243 PCCAP05165 728 aaPredicted RBP19.91■□□□□ 0.78
TMEM53-204ENST00000372243 ZBTB38Q8NAP3 1195 aaPredicted RBP19.91■□□□□ 0.78
TMEM53-204ENST00000372243 GNAI2P04899 355 aa19.9■□□□□ 0.78
TMEM53-204ENST00000372243 TM4SF1P30408 202 aa19.9■□□□□ 0.78
TMEM53-204ENST00000372243 CASP7P55210 303 aa19.9■□□□□ 0.78
TMEM53-204ENST00000372243 SUSD4Q5VX71 490 aa19.9■□□□□ 0.78
TMEM53-204ENST00000372243 SLC16A10Q8TF71 515 aa19.9■□□□□ 0.78
TMEM53-204ENST00000372243 CARMIL3Q8ND23 1372 aa19.89■□□□□ 0.77
TMEM53-204ENST00000372243 NFIXQ14938 502 aa19.89■□□□□ 0.77
TMEM53-204ENST00000372243 UTP14AQ9BVJ6 771 aaKnown RBP19.89■□□□□ 0.77
TMEM53-204ENST00000372243 TRMT112Q9UI30 125 aaKnown RBP19.89■□□□□ 0.77
TMEM53-204ENST00000372243 CDHR2Q9BYE9 1310 aa19.89■□□□□ 0.77
TMEM53-204ENST00000372243 NTSR2O95665 410 aa19.88■□□□□ 0.77
TMEM53-204ENST00000372243 UBE3BQ7Z3V4 1068 aa19.88■□□□□ 0.77
TMEM53-204ENST00000372243 NYXQ9GZU5 481 aa19.88■□□□□ 0.77
TMEM53-204ENST00000372243 BICDL1Q6ZP65 573 aa19.87■□□□□ 0.77
TMEM53-204ENST00000372243 FAM89AQ96GI7 184 aa19.87■□□□□ 0.77
TMEM53-204ENST00000372243 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
TMEM53-204ENST00000372243 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
TMEM53-204ENST00000372243 CASZ1Q86V15 1759 aa19.86■□□□□ 0.77
TMEM53-204ENST00000372243 TPTE2Q6XPS3 522 aa19.86■□□□□ 0.77
TMEM53-204ENST00000372243 LRRFIP2Q9Y608 721 aaKnown RBP19.86■□□□□ 0.77
TMEM53-204ENST00000372243 HSP90B1P14625 803 aaKnown RBP19.85■□□□□ 0.77
TMEM53-204ENST00000372243 RPAP2Q8IXW5 612 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-204ENST00000372243 PLA2G12BQ9BX93 195 aa19.85■□□□□ 0.77
TMEM53-204ENST00000372243 NBPF5PQ86XG9 351 aaPredicted RBP19.84■□□□□ 0.77
TMEM53-204ENST00000372243 KAZALD1Q96I82 304 aa19.84■□□□□ 0.77
TMEM53-204ENST00000372243 SUCLG2Q96I99 432 aa19.84■□□□□ 0.77
TMEM53-204ENST00000372243 C1orf115Q9H7X2 142 aa19.84■□□□□ 0.77
TMEM53-204ENST00000372243 PPP4R2Q9NY27 417 aa19.84■□□□□ 0.77
TMEM53-204ENST00000372243 LAMB2P55268 1798 aa19.84■□□□□ 0.77
TMEM53-204ENST00000372243 POLRMTO00411 1230 aaKnown RBP19.83■□□□□ 0.77
TMEM53-204ENST00000372243 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
TMEM53-204ENST00000372243 PCDHB15Q9Y5E8 787 aa19.83■□□□□ 0.77
TMEM53-204ENST00000372243 NRXN2Q9P2S2 1712 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 FAM177BA6PVY3 158 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 IRS4O14654 1257 aaPredicted RBP19.83■□□□□ 0.76
TMEM53-204ENST00000372243 SERPINB2P05120 415 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 DDR1Q08345 913 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 MTX1Q13505 466 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.76
TMEM53-204ENST00000372243 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.76
TMEM53-204ENST00000372243 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.76
TMEM53-204ENST00000372243 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 CEP85Q6P2H3 762 aa19.83■□□□□ 0.76
TMEM53-204ENST00000372243 JARID2Q92833 1246 aaPredicted RBP19.83■□□□□ 0.76
TMEM53-204ENST00000372243 DDX60Q8IY21 1712 aaKnown RBP19.82■□□□□ 0.76
TMEM53-204ENST00000372243 ANKRD44Q8N8A2 993 aa19.82■□□□□ 0.76
TMEM53-204ENST00000372243 BICC1Q9H694 974 aaKnown RBP19.82■□□□□ 0.76
TMEM53-204ENST00000372243 RIC1Q4ADV7 1423 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 PDE8AO60658 829 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 MMP10P09238 476 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
TMEM53-204ENST00000372243 FOXO4P98177 505 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 SYNE4Q8N205 404 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 MYH3P11055 1940 aa19.81■□□□□ 0.76
TMEM53-204ENST00000372243 ATP8B2P98198 1209 aa19.8■□□□□ 0.76
TMEM53-204ENST00000372243 ERFEQ4G0M1 354 aa19.8■□□□□ 0.76
TMEM53-204ENST00000372243 NUTM1Q86Y26 1132 aa19.8■□□□□ 0.76
TMEM53-204ENST00000372243 CNBD1Q8NA66 436 aa19.8■□□□□ 0.76
TMEM53-204ENST00000372243 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
TMEM53-204ENST00000372243 HDAC1Q13547 482 aaPredicted RBP19.79■□□□□ 0.76
TMEM53-204ENST00000372243 EPHA10Q5JZY3 1008 aa19.79■□□□□ 0.76
TMEM53-204ENST00000372243 MSL1Q68DK7 614 aa19.79■□□□□ 0.76
TMEM53-204ENST00000372243 PRR5LQ6MZQ0 368 aa19.79■□□□□ 0.76
TMEM53-204ENST00000372243 CSF1RP07333 972 aa19.78■□□□□ 0.76
TMEM53-204ENST00000372243 SIRT2Q8IXJ6 389 aa19.78■□□□□ 0.76
TMEM53-204ENST00000372243 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
TMEM53-204ENST00000372243 HMMRO75330 724 aa19.78■□□□□ 0.76
TMEM53-204ENST00000372243 ABCC12Q96J65 1359 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 NPHP1O15259 732 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 CTSWP56202 376 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 ST5P78524 1137 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 SSH3Q8TE77 659 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 CCDC136Q96JN2 1154 aa19.77■□□□□ 0.76
TMEM53-204ENST00000372243 RWDD1Q9H446 243 aaPredicted RBP19.77■□□□□ 0.76
TMEM53-204ENST00000372243 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
TMEM53-204ENST00000372243 TTLL11Q8NHH1 800 aa19.76■□□□□ 0.75
TMEM53-204ENST00000372243 PNMA6EA0A0J9YXQ4 647 aa19.75■□□□□ 0.75
TMEM53-204ENST00000372243 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-204ENST00000372243 SRGAP3O43295 1099 aa19.75■□□□□ 0.75
TMEM53-204ENST00000372243 POLA2Q14181 598 aa19.75■□□□□ 0.75
TMEM53-204ENST00000372243 SF3B3Q15393 1217 aaKnown RBP19.75■□□□□ 0.75
TMEM53-204ENST00000372243 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
TMEM53-204ENST00000372243 SOCS7O14512 581 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms