RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 TNNT3P45378 269 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 ALDH1L2Q3SY69 923 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 MRRFQ96E11 262 aaKnown RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 ARHGAP23Q9P227 1491 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 TBX22Q9Y458 520 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 CEP83Q9Y592 693 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
ATG4A-203ENST00000372232 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-203ENST00000372232 CT47A1Q5JQC4 288 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-203ENST00000372232 BRMS1Q9HCU9 246 aa10.62□□□□□ -0.71
ATG4A-203ENST00000372232 RAD50Q92878 1312 aa10.62□□□□□ -0.71
ATG4A-203ENST00000372232 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
ATG4A-203ENST00000372232 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
ATG4A-203ENST00000372232 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
ATG4A-203ENST00000372232 THUMPD2Q9BTF0 503 aaKnown RBP10.62□□□□□ -0.71
ATG4A-203ENST00000372232 RSPH14Q9UHP6 348 aa10.62□□□□□ -0.71
ATG4A-203ENST00000372232 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
ATG4A-203ENST00000372232 GPR37L1O60883 481 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 ICE2Q659A1 982 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 TICAM2Q86XR7 235 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-203ENST00000372232 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 IFT57Q9NWB7 429 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 DDX19BQ9UMR2 479 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 USP6P35125 1406 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 USP17L8P0C7I0 530 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 GNAI1P63096 354 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 RAD51AP2Q09MP3 1159 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
ATG4A-203ENST00000372232 OVOS2A0A0J9YW53 1432 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 OVOS2Q6IE36 1432 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 SETD1BQ9UPS6 1966 aaKnown RBP10.6□□□□□ -0.71
ATG4A-203ENST00000372232 BAG4O95429 457 aaKnown RBP10.6□□□□□ -0.71
ATG4A-203ENST00000372232 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 EP400NLQ6ZTU2 488 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 KRT222Q8N1A0 295 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 GJD4Q96KN9 370 aaPredicted RBP10.6□□□□□ -0.71
ATG4A-203ENST00000372232 FAM53CQ9NYF3 392 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 PTCH1Q13635 1447 aa10.6□□□□□ -0.71
ATG4A-203ENST00000372232 VAMP4O75379 141 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 SATB1Q01826 763 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 CAVIN1Q6NZI2 390 aaKnown RBP10.59□□□□□ -0.71
ATG4A-203ENST00000372232 RASSF4Q9H2L5 321 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 TOPAZ1Q8N9V7 1692 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 SSH2Q76I76 1423 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 NRKQ7Z2Y5 1582 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 ERICH4A6NGS2 130 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 GUCY2CP25092 1073 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 NCBP1Q09161 790 aaKnown RBP10.59□□□□□ -0.71
ATG4A-203ENST00000372232 EIF4A2Q14240 407 aaKnown RBP10.59□□□□□ -0.71
ATG4A-203ENST00000372232 LRSAM1Q6UWE0 723 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 TMEM57Q8N5G2 664 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 PXYLP1Q8TE99 480 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
ATG4A-203ENST00000372232 CYP2C19P33261 490 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 HNRNPH2P55795 449 aaKnown RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 KIF18AQ8NI77 898 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 ZBTB40Q9NUA8 1239 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 TFIP11Q9UBB9 837 aaKnown RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 CEP170BQ9Y4F5 1589 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 USP31Q70CQ4 1352 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 ZNF142P52746 1687 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 SSFA2P28290 1259 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
ATG4A-203ENST00000372232 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 TSPYL6Q8N831 410 aa10.58□□□□□ -0.72
ATG4A-203ENST00000372232 HSPA2P54652 639 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 CACNB1Q02641 598 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 SULT6B1Q6IMI4 303 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 TTC21AQ8NDW8 1320 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 FAM83GA6ND36 823 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
ATG4A-203ENST00000372232 TRERF1Q96PN7 1200 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 PRM3Q9NNZ6 103 aa10.57□□□□□ -0.72
ATG4A-203ENST00000372232 REC8O95072 547 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 ARHGAP45Q92619 1136 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
ATG4A-203ENST00000372232 MOXD2PA6NHM9 499 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 ELL2O00472 640 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 DCTN1Q14203 1278 aa10.55□□□□□ -0.72
ATG4A-203ENST00000372232 TWISTNBQ3B726 338 aaPredicted RBP10.55□□□□□ -0.72
ATG4A-203ENST00000372232 MUM1L1Q5H9M0 696 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms