RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TRIM22Q8IYM9 498 aa16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 FBLN1P23142 703 aa16.22■□□□□ 0.19
RAPGEF1-202ENST00000372190 PSMD1Q99460 953 aa16.21■□□□□ 0.19
RAPGEF1-202ENST00000372190 PRIMPOLQ96LW4 560 aa16.21■□□□□ 0.19
RAPGEF1-202ENST00000372190 GCP02774 474 aa16.21■□□□□ 0.18
RAPGEF1-202ENST00000372190 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.18
RAPGEF1-202ENST00000372190 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.18
RAPGEF1-202ENST00000372190 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 STIM1Q13586 685 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 MCM4P33991 863 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 ZBTB17Q13105 803 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 KIF5CO60282 957 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 KRT18P05783 430 aaKnown RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 AKAP4Q5JQC9 854 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 C16orf71Q8IYS4 520 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 MCM5P33992 734 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 SLFN5Q08AF3 891 aa16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 DNAJC21Q5F1R6 531 aaKnown RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 SMAP1Q8IYB5 467 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-202ENST00000372190 NPATQ14207 1427 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 LRCH2Q5VUJ6 765 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 CDCA7Q9BWT1 371 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 NSRP1Q9H0G5 558 aaKnown RBP16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 LUC7L2Q9Y383 392 aaKnown RBP16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 PUS7Q96PZ0 661 aaKnown RBP16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 F6X3S4 739 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
RAPGEF1-202ENST00000372190 TACC1O75410 805 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 RPUSD2Q8IZ73 545 aaKnown RBP16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 SMTNL1A8MU46 457 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 CEP57L1Q8IYX8 460 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 USP21Q9UK80 565 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 MYO1BO43795 1136 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 FMNL3Q8IVF7 1028 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 CCDC97Q96F63 343 aaPredicted RBP16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
RAPGEF1-202ENST00000372190 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CWC27Q6UX04 472 aaKnown RBP16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 TSPOAP1O95153 1857 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 ZNF76P36508 570 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 FLIIQ13045 1269 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 STK38Q15208 465 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CLNS1AP54105 237 aaKnown RBP16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 SCLT1Q96NL6 688 aa16.17■□□□□ 0.18
RAPGEF1-202ENST00000372190 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 ATP2C2O75185 946 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 KIF4BQ2VIQ3 1234 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 MAST1Q9Y2H9 1570 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 FLT4P35916 1363 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 STK3Q13188 491 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 CCDC121Q6ZUS5 278 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 C10orf67Q8IYJ2 551 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 MINDY4BA8MYZ0 360 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 LDHAL6AQ6ZMR3 332 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 NYXQ9GZU5 481 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
RAPGEF1-202ENST00000372190 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 LMNTD2Q8IXW0 634 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 ORAI2Q96SN7 254 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 GBP7Q8N8V2 638 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 GOPCQ9HD26 462 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 SERPINA10Q9UK55 444 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 CETN2P41208 172 aa16.15■□□□□ 0.18
RAPGEF1-202ENST00000372190 OTUD6BQ8N6M0 293 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms