RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 ZNF213O14771 459 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 MYO1BO43795 1136 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 STIM1Q13586 685 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 CCDC96Q2M329 555 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 IQCA1Q86XH1 822 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 PARP3Q9Y6F1 533 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 SWAP70Q9UH65 585 aa15.46■□□□□ 0.06
RAPGEF1-201ENST00000372189 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 SKIDA1Q1XH10 827 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 ZFYVE27Q5T4F4 411 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 BMP2KQ9NSY1 1161 aaPredicted RBP15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 ZFYVE9O95405 1425 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 GSTO1P78417 241 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 TNIP1Q15025 636 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 CCDC181Q5TID7 509 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 IQCEQ6IPM2 695 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 EVI5LQ96CN4 794 aa15.45■□□□□ 0.06
RAPGEF1-201ENST00000372189 UQCRFS1P1P0C7P4 283 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 MAP3K5Q99683 1374 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 CCDC196A0A1B0GTZ2 297 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 A0A1W2PP64 1363 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 SYCP1Q15431 976 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 GOLIM4O00461 696 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 SSBP05455 408 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 ECHDC1Q9NTX5 307 aa15.44■□□□□ 0.06
RAPGEF1-201ENST00000372189 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 CEP131Q9UPN4 1083 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 FAM177A1Q8N128 213 aaPredicted RBP15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 EYA1Q99502 592 aa15.43■□□□□ 0.06
RAPGEF1-201ENST00000372189 UBXN4Q92575 508 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 CCDC183Q5T5S1 534 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 KSR2Q6VAB6 950 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 CUL5Q93034 780 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 CABP5Q9NP86 173 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 SNRKQ9NRH2 765 aa15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 TARBP1Q13395 1621 aaKnown RBP15.42■□□□□ 0.06
RAPGEF1-201ENST00000372189 DDX11Q96FC9 970 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 ARHGEF12Q9NZN5 1544 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 LIG1P18858 919 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 TMCO3Q6UWJ1 677 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 ERICH4A6NGS2 130 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.069e-7■■■■■ 101.5
RAPGEF1-201ENST00000372189 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 FAM114A1Q8IWE2 563 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 FEZ1Q99689 392 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 TMEM2Q9UHN6 1383 aa15.41■□□□□ 0.06
RAPGEF1-201ENST00000372189 ARHGAP45Q92619 1136 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 SEPT11Q9NVA2 429 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 ADGRL2O95490 1459 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 ZGPATQ8N5A5 531 aaKnown RBP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 SAMD9Q5K651 1589 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 MATR3P43243 847 aaKnown RBP eCLIP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 PDE4BQ07343 736 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 PTPN14Q15678 1187 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 GBP3Q9H0R5 595 aa15.4■□□□□ 0.06
RAPGEF1-201ENST00000372189 IFIT3O14879 490 aaKnown RBP15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 CATIPQ7Z7H3 387 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 CRNKL1Q9BZJ0 848 aaKnown RBP15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 EHMT1Q9H9B1 1298 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 GRM8O00222 908 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 CCDC175P0C221 793 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 MCM5P33992 734 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
RAPGEF1-201ENST00000372189 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 DNAI2Q9GZS0 605 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 CENPHQ9H3R5 247 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 STK32BQ9NY57 414 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 CBX1P83916 185 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 PZPP20742 1482 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 GNPATO15228 680 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 KIAA1328Q86T90 577 aa15.38■□□□□ 0.05
RAPGEF1-201ENST00000372189 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms