RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 ATP8B2P98198 1209 aa22.96■■□□□ 1.27
VEGFA-206ENST00000372077 H7C1W4 665 aa22.95■■□□□ 1.27
VEGFA-206ENST00000372077 CASP7P55210 303 aa22.95■■□□□ 1.27
VEGFA-206ENST00000372077 SMC5Q8IY18 1101 aa22.95■■□□□ 1.26
VEGFA-206ENST00000372077 ZNF34Q8IZ26 560 aa22.95■■□□□ 1.26
VEGFA-206ENST00000372077 AK7Q96M32 723 aa22.95■■□□□ 1.26
VEGFA-206ENST00000372077 KAZALD1Q96I82 304 aa22.94■■□□□ 1.26
VEGFA-206ENST00000372077 SUCLG2Q96I99 432 aa22.94■■□□□ 1.26
VEGFA-206ENST00000372077 C8orf34Q49A92 452 aa22.94■■□□□ 1.26
VEGFA-206ENST00000372077 AMIGO3Q86WK7 504 aa22.94■■□□□ 1.26
VEGFA-206ENST00000372077 SEC24BO95487 1268 aa22.93■■□□□ 1.26
VEGFA-206ENST00000372077 CLEC4GQ6UXB4 293 aa22.93■■□□□ 1.26
VEGFA-206ENST00000372077 NLRP10Q86W26 655 aa22.93■■□□□ 1.26
VEGFA-206ENST00000372077 NARFQ9UHQ1 456 aa22.93■■□□□ 1.26
VEGFA-206ENST00000372077 SMIM5Q71RC9 77 aa22.92■■□□□ 1.26
VEGFA-206ENST00000372077 MTX1Q13505 466 aa22.92■■□□□ 1.26
VEGFA-206ENST00000372077 UBR3Q6ZT12 1888 aa22.92■■□□□ 1.26
VEGFA-206ENST00000372077 SCN7AQ01118 1682 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 HMMRO75330 724 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 UBE3BQ7Z3V4 1068 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 ARHGEF1Q92888 912 aaKnown RBP22.91■■□□□ 1.26
VEGFA-206ENST00000372077 ADRA2BP18089 450 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 GCC1Q96CN9 775 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 DCTPP1Q9H773 170 aa22.91■■□□□ 1.26
VEGFA-206ENST00000372077 PNMA6EA0A0J9YXQ4 647 aa22.9■■□□□ 1.26
VEGFA-206ENST00000372077 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
VEGFA-206ENST00000372077 GPTP24298 496 aa22.9■■□□□ 1.26
VEGFA-206ENST00000372077 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
VEGFA-206ENST00000372077 SSH3Q8TE77 659 aa22.9■■□□□ 1.26
VEGFA-206ENST00000372077 PCCAP05165 728 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-206ENST00000372077 JARID2Q92833 1246 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-206ENST00000372077 UBN2Q6ZU65 1347 aa22.89■■□□□ 1.26
VEGFA-206ENST00000372077 POLA2Q14181 598 aa22.89■■□□□ 1.26
VEGFA-206ENST00000372077 PPP1R42Q7Z4L9 355 aa22.89■■□□□ 1.26
VEGFA-206ENST00000372077 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.26
VEGFA-206ENST00000372077 FAM161AQ3B820 660 aa22.89■■□□□ 1.25
VEGFA-206ENST00000372077 SPRYD3Q8NCJ5 442 aa22.89■■□□□ 1.25
VEGFA-206ENST00000372077 BICC1Q9H694 974 aaKnown RBP22.89■■□□□ 1.25
VEGFA-206ENST00000372077 C4AP0C0L4 1744 aa22.88■■□□□ 1.25
VEGFA-206ENST00000372077 ZBTB38Q8NAP3 1195 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-206ENST00000372077 CAMKK2Q96RR4 588 aa22.88■■□□□ 1.25
VEGFA-206ENST00000372077 SSFA2P28290 1259 aa22.88■■□□□ 1.25
VEGFA-206ENST00000372077 AKT1S1Q96B36 256 aa22.88■■□□□ 1.25
VEGFA-206ENST00000372077 PARP10Q53GL7 1025 aa22.87■■□□□ 1.25
VEGFA-206ENST00000372077 EPHA10Q5JZY3 1008 aa22.87■■□□□ 1.25
VEGFA-206ENST00000372077 RABL6Q3YEC7 729 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-206ENST00000372077 USPL1Q5W0Q7 1092 aa22.87■■□□□ 1.25
VEGFA-206ENST00000372077 UBE2Q2Q8WVN8 375 aa22.87■■□□□ 1.25
VEGFA-206ENST00000372077 SRP68Q9UHB9 627 aaKnown RBP22.86■■□□□ 1.25
VEGFA-206ENST00000372077 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
VEGFA-206ENST00000372077 USP42Q9H9J4 1324 aaKnown RBP22.86■■□□□ 1.25
VEGFA-206ENST00000372077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.86■■□□□ 1.25
VEGFA-206ENST00000372077 ZPR1O75312 459 aa22.86■■□□□ 1.25
VEGFA-206ENST00000372077 CDHR2Q9BYE9 1310 aa22.86■■□□□ 1.25
VEGFA-206ENST00000372077 SRGAP3O43295 1099 aa22.85■■□□□ 1.25
VEGFA-206ENST00000372077 PHF14O94880 888 aa22.85■■□□□ 1.25
VEGFA-206ENST00000372077 RFC4P35249 363 aa22.85■■□□□ 1.25
VEGFA-206ENST00000372077 FOXO4P98177 505 aa22.85■■□□□ 1.25
VEGFA-206ENST00000372077 NIP7Q9Y221 180 aaKnown RBP eCLIP22.85■■□□□ 1.25
VEGFA-206ENST00000372077 EN1Q05925 392 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-206ENST00000372077 PLA2G12BQ9BX93 195 aa22.85■■□□□ 1.25
VEGFA-206ENST00000372077 EZH2Q15910 746 aaKnown RBP22.84■■□□□ 1.25
VEGFA-206ENST00000372077 ZNF827Q17R98 1081 aa22.84■■□□□ 1.25
VEGFA-206ENST00000372077 SUSD4Q5VX71 490 aa22.84■■□□□ 1.25
VEGFA-206ENST00000372077 FAM89AQ96GI7 184 aa22.84■■□□□ 1.25
VEGFA-206ENST00000372077 NUCB1Q02818 461 aa22.83■■□□□ 1.25
VEGFA-206ENST00000372077 NFKBIBQ15653 356 aa22.83■■□□□ 1.25
VEGFA-206ENST00000372077 TRMT112Q9UI30 125 aaKnown RBP22.83■■□□□ 1.25
VEGFA-206ENST00000372077 SLKQ9H2G2 1235 aaPredicted RBP22.83■■□□□ 1.24
VEGFA-206ENST00000372077 SF3B2Q13435 895 aaKnown RBP22.82■■□□□ 1.24
VEGFA-206ENST00000372077 TBC1D9BQ66K14 1250 aa22.82■■□□□ 1.24
VEGFA-206ENST00000372077 BAG6P46379 1132 aa22.81■■□□□ 1.24
VEGFA-206ENST00000372077 UTP14AQ9BVJ6 771 aaKnown RBP22.81■■□□□ 1.24
VEGFA-206ENST00000372077 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-206ENST00000372077 NTSR2O95665 410 aa22.81■■□□□ 1.24
VEGFA-206ENST00000372077 SYNE4Q8N205 404 aa22.81■■□□□ 1.24
VEGFA-206ENST00000372077 ANKRD45Q5TZF3 282 aa22.8■■□□□ 1.24
VEGFA-206ENST00000372077 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
VEGFA-206ENST00000372077 CCDC125Q86Z20 511 aa22.8■■□□□ 1.24
VEGFA-206ENST00000372077 CHD1LQ86WJ1 897 aa22.79■■□□□ 1.24
VEGFA-206ENST00000372077 TFCP2L1Q9NZI6 479 aa22.79■■□□□ 1.24
VEGFA-206ENST00000372077 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
VEGFA-206ENST00000372077 SH3TC1Q8TE82 1336 aa22.79■■□□□ 1.24
VEGFA-206ENST00000372077 TUBGCP6Q96RT7 1819 aa22.78■■□□□ 1.24
VEGFA-206ENST00000372077 IRS4O14654 1257 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-206ENST00000372077 EXOC6BQ9Y2D4 811 aa22.78■■□□□ 1.24
VEGFA-206ENST00000372077 CSF1RP07333 972 aa22.78■■□□□ 1.24
VEGFA-206ENST00000372077 RFX5P48382 616 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-206ENST00000372077 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
VEGFA-206ENST00000372077 DDRGK1Q96HY6 314 aa22.78■■□□□ 1.24
VEGFA-206ENST00000372077 GYS1P13807 737 aa22.77■■□□□ 1.24
VEGFA-206ENST00000372077 SETDB2Q96T68 719 aa22.77■■□□□ 1.24
VEGFA-206ENST00000372077 BRPF3Q9ULD4 1205 aa22.77■■□□□ 1.24
VEGFA-206ENST00000372077 SURF6O75683 361 aaKnown RBP22.77■■□□□ 1.23
VEGFA-206ENST00000372077 DEFB132Q7Z7B7 95 aa22.77■■□□□ 1.23
VEGFA-206ENST00000372077 PDE8AO60658 829 aa22.76■■□□□ 1.23
VEGFA-206ENST00000372077 RAB11FIP3O75154 756 aa22.76■■□□□ 1.23
VEGFA-206ENST00000372077 BICDL1Q6ZP65 573 aa22.76■■□□□ 1.23
VEGFA-206ENST00000372077 FAM177BA6PVY3 158 aa22.75■■□□□ 1.23
VEGFA-206ENST00000372077 COL23A1Q86Y22 540 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms