RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
TCTN3-202ENST00000371209 INTS3Q68E01 1043 aaKnown RBP13.28□□□□□ -0.28
TCTN3-202ENST00000371209 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
TCTN3-202ENST00000371209 MYD88Q99836 296 aa13.28□□□□□ -0.28
TCTN3-202ENST00000371209 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
TCTN3-202ENST00000371209 IGKV5-2P06315 115 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 MS4A1P11836 297 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 RFC4P35249 363 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.29
TCTN3-202ENST00000371209 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
TCTN3-202ENST00000371209 COG6Q9Y2V7 657 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 NUP98P52948 1817 aa13.27□□□□□ -0.29
TCTN3-202ENST00000371209 ANKRD36CQ5JPF3 1778 aa13.26□□□□□ -0.29
TCTN3-202ENST00000371209 ATP5J2-PTCD1G3V325 749 aa13.26□□□□□ -0.29
TCTN3-202ENST00000371209 TCIRG1Q13488 830 aa13.26□□□□□ -0.29
TCTN3-202ENST00000371209 CWF19L2Q2TBE0 894 aaKnown RBP13.26□□□□□ -0.29
TCTN3-202ENST00000371209 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
TCTN3-202ENST00000371209 ZPR1O75312 459 aa13.25□□□□□ -0.29
TCTN3-202ENST00000371209 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
TCTN3-202ENST00000371209 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
TCTN3-202ENST00000371209 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
TCTN3-202ENST00000371209 LINS1Q8NG48 757 aa13.25□□□□□ -0.29
TCTN3-202ENST00000371209 ISCA1Q9BUE6 129 aa13.25□□□□□ -0.29
TCTN3-202ENST00000371209 SRCIN1Q9C0H9 1055 aa13.25□□□□□ -0.29
TCTN3-202ENST00000371209 NEURL1BA8MQ27 555 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 GYS1P13807 737 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 GPTP24298 496 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 FLAD1Q8NFF5 587 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 ANP32EQ9BTT0 268 aa13.24□□□□□ -0.29
TCTN3-202ENST00000371209 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
TCTN3-202ENST00000371209 AFDNP55196 1824 aaKnown RBP13.24□□□□□ -0.29
TCTN3-202ENST00000371209 RGL2O15211 777 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 FKBP8Q14318 412 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 ZNF652Q9Y2D9 606 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 UBN2Q6ZU65 1347 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
TCTN3-202ENST00000371209 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 TBC1D9BQ66K14 1250 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
TCTN3-202ENST00000371209 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
TCTN3-202ENST00000371209 CLCN6P51797 869 aa13.22□□□□□ -0.29
TCTN3-202ENST00000371209 GCKRQ14397 625 aa13.22□□□□□ -0.29
TCTN3-202ENST00000371209 MEIS3Q99687 375 aa13.22□□□□□ -0.29
TCTN3-202ENST00000371209 USP44Q9H0E7 712 aa13.22□□□□□ -0.29
TCTN3-202ENST00000371209 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
TCTN3-202ENST00000371209 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.29
TCTN3-202ENST00000371209 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
TCTN3-202ENST00000371209 NEFLP07196 543 aa13.21□□□□□ -0.3
TCTN3-202ENST00000371209 R3HDM1Q15032 1099 aaKnown RBP13.21□□□□□ -0.3
TCTN3-202ENST00000371209 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.3
TCTN3-202ENST00000371209 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.3
TCTN3-202ENST00000371209 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.3
TCTN3-202ENST00000371209 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.3
TCTN3-202ENST00000371209 CASZ1Q86V15 1759 aa13.21□□□□□ -0.3
TCTN3-202ENST00000371209 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
TCTN3-202ENST00000371209 NFIXQ14938 502 aa13.2□□□□□ -0.3
TCTN3-202ENST00000371209 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
TCTN3-202ENST00000371209 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
TCTN3-202ENST00000371209 UTYO14607 1347 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 GRM8O00222 908 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 TM4SF1P30408 202 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 CASP7P55210 303 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
TCTN3-202ENST00000371209 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
TCTN3-202ENST00000371209 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 NTSR2O95665 410 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 DDR1Q08345 913 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
TCTN3-202ENST00000371209 C9orf78Q9NZ63 289 aaPredicted RBP13.18□□□□□ -0.3
TCTN3-202ENST00000371209 H7C1W4 665 aa13.17□□□□□ -0.3
TCTN3-202ENST00000371209 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
TCTN3-202ENST00000371209 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
TCTN3-202ENST00000371209 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
TCTN3-202ENST00000371209 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
TCTN3-202ENST00000371209 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
TCTN3-202ENST00000371209 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 GNAI3P08754 354 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 UTP14AQ9BVJ6 771 aaKnown RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
TCTN3-202ENST00000371209 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
TCTN3-202ENST00000371209 SOCS7O14512 581 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms