RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
EXOSC1-203ENST00000370886 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 C21orf2O43822 256 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 KDM3BQ7LBC6 1761 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
EXOSC1-203ENST00000370886 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 COL11A2P13942 1736 aaPredicted RBP13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 BCL2L12Q9HB09 334 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
EXOSC1-203ENST00000370886 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 DDNO94850 711 aaPredicted RBP13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
EXOSC1-203ENST00000370886 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 NPHP1O15259 732 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 VEGFBP49765 207 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 LBX1P52954 281 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 HLFQ16534 295 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 CNKSR1Q969H4 720 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 ZNF652Q9Y2D9 606 aa13.69□□□□□ -0.22
EXOSC1-203ENST00000370886 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
EXOSC1-203ENST00000370886 TBC1D9BQ66K14 1250 aa13.68□□□□□ -0.22
EXOSC1-203ENST00000370886 G2E3Q7L622 706 aa13.68□□□□□ -0.22
EXOSC1-203ENST00000370886 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
EXOSC1-203ENST00000370886 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
EXOSC1-203ENST00000370886 MAP3K15Q6ZN16 1313 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 SLX4Q8IY92 1834 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 GPTP24298 496 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 MAP2K1Q02750 393 aaPredicted RBP13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 PRR5LQ6MZQ0 368 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 SMC4Q9NTJ3 1288 aa13.67□□□□□ -0.22
EXOSC1-203ENST00000370886 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 ST5P78524 1137 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 CNBD1Q8NA66 436 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 SSH1Q8WYL5 1049 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
EXOSC1-203ENST00000370886 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
EXOSC1-203ENST00000370886 HSPA8P11142 646 aaKnown RBP13.65□□□□□ -0.22
EXOSC1-203ENST00000370886 FLIIQ13045 1269 aa13.65□□□□□ -0.22
EXOSC1-203ENST00000370886 EAPPQ56P03 285 aaPredicted RBP13.65□□□□□ -0.22
EXOSC1-203ENST00000370886 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
EXOSC1-203ENST00000370886 PI4KAP2A4QPH2 592 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 RASSF10A6NK89 507 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 ITGBL1O95965 494 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 DEFB115Q30KQ5 88 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 PI4KAP1Q8N8J0 262 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 MASTLQ96GX5 879 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 HACL1Q9UJ83 578 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
EXOSC1-203ENST00000370886 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 CT47B1P0C2W7 299 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 SRGNP10124 158 aa13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 MYD88Q99836 296 aa13.63□□□□□ -0.23
EXOSC1-203ENST00000370886 EPHX2P34913 555 aa13.62□□□□□ -0.23
EXOSC1-203ENST00000370886 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
EXOSC1-203ENST00000370886 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
EXOSC1-203ENST00000370886 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
EXOSC1-203ENST00000370886 FRAT1Q92837 279 aaPredicted RBP13.62□□□□□ -0.23
EXOSC1-203ENST00000370886 BEGAINQ9BUH8 593 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms