RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 TYRO3Q06418 890 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 ZNF397Q8NF99 534 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 RANBP6O60518 1105 aaKnown RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 MAP9Q49MG5 647 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 HS1BP3Q53T59 392 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 ZBTB9Q96C00 473 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 PHACTR3Q96KR7 559 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 ZSCAN16Q9H4T2 348 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 SAMD9Q5K651 1589 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 POLR3AO14802 1390 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 CEP85Q6P2H3 762 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 USP26Q9BXU7 913 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 PRAG1Q86YV5 1406 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 GOLGA6L7A0A1B0GV03 622 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 SHTN1A0MZ66 631 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
COL21A1-203ENST00000370819 AK2P54819 239 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 ATP8B2P98198 1209 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 AMOTQ4VCS5 1084 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 CACNA2D4Q7Z3S7 1137 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 AOPEPQ8N6M6 819 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 OTUD7AQ8TE49 926 aaPredicted RBP8.9□□□□□ -0.98
COL21A1-203ENST00000370819 HMG20BQ9P0W2 317 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 PIK3R4Q99570 1358 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 RNF123Q5XPI4 1314 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC171Q6TFL3 1326 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.98
COL21A1-203ENST00000370819 CPA1P15085 419 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 UBASH3AP57075 661 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 CTCFLQ8NI51 663 aaPredicted RBP8.9□□□□□ -0.98
COL21A1-203ENST00000370819 ZRANB1Q9UGI0 708 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 IGHMBP2P38935 993 aaKnown RBP8.9□□□□□ -0.98
COL21A1-203ENST00000370819 PAFAH1B1P43034 410 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 BICDL1Q6ZP65 573 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 POLKQ9UBT6 870 aa8.9□□□□□ -0.98
COL21A1-203ENST00000370819 KLF18A0A0U1RQI7 1052 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 DTNBO60941 627 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 LIG1P18858 919 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 SYKP43405 635 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 SSRP1Q08945 709 aaKnown RBP8.9□□□□□ -0.99
COL21A1-203ENST00000370819 MAP3K12Q12852 859 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 MCM6Q14566 821 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 FKBP15Q5T1M5 1219 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 CCDC150Q8NCX0 1101 aa8.9□□□□□ -0.99
COL21A1-203ENST00000370819 PA2G4Q9UQ80 394 aaKnown RBP8.9□□□□□ -0.99
COL21A1-203ENST00000370819 NPHP3Q7Z494 1330 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 YEATS4O95619 227 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 SYT1P21579 422 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 RBM25P49756 843 aaKnown RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 TDRD12Q587J7 1177 aaKnown RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 LUZP1Q86V48 1076 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 CHPF2Q9P2E5 772 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 GPTP24298 496 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 SEPT7Q16181 437 aaKnown RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 IQCA1Q86XH1 822 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 MRPS27Q92552 414 aaKnown RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 TTC21BQ7Z4L5 1316 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 UGGT2Q9NYU1 1516 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 ANKRD62A6NC57 917 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 N4BP3O15049 544 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 STARD3NLO95772 234 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 MARCKSP29966 332 aaPredicted RBP8.89□□□□□ -0.99
COL21A1-203ENST00000370819 LDHAL6AQ6ZMR3 332 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 ANKLE2Q86XL3 938 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 SLC26A6Q9BXS9 759 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 ARFGAP3Q9NP61 516 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
COL21A1-203ENST00000370819 ACEP12821 1306 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 FAM135AQ9P2D6 1515 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 GOLGA6L9A6NEM1 432 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 SLU7O95391 586 aaKnown RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 CHMLP26374 656 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 TIGD1Q96MW7 591 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 CCDC113Q9H0I3 377 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 MTIF2P46199 727 aaKnown RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 Q6ZUG5 572 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 MKNK2Q9HBH9 465 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 USO1O60763 962 aaKnown RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 IDEP14735 1019 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 NLRP5P59047 1200 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 HLTFQ14527 1009 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 RNF187Q5TA31 235 aaPredicted RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 FAM173BQ6P4H8 233 aa8.88□□□□□ -0.99
COL21A1-203ENST00000370819 C17orf53Q8N3J3 647 aaPredicted RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 INTS4Q96HW7 963 aaKnown RBP8.88□□□□□ -0.99
COL21A1-203ENST00000370819 CCDC194A0A1B0GVG4 234 aa8.87□□□□□ -0.99
COL21A1-203ENST00000370819 CALRP27797 417 aaKnown RBP8.87□□□□□ -0.99
COL21A1-203ENST00000370819 SPECC1Q5M775 1068 aa8.87□□□□□ -0.99
COL21A1-203ENST00000370819 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms