RNA–Protein interactions for RNA: ENST00000370817.3

COL21A1-202, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 3

Gene COL21A1, Length 624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-202ENST00000370817 FAM174AQ8TBP5 190 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 ARXQ96QS3 562 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 LTN1O94822 1766 aa11.41□□□□□ -0.58
COL21A1-202ENST00000370817 TERTO14746 1132 aaKnown RBP11.4□□□□□ -0.58
COL21A1-202ENST00000370817 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
COL21A1-202ENST00000370817 RGPD5Q99666 1765 aa11.4□□□□□ -0.58
COL21A1-202ENST00000370817 ANKRD36BQ8N2N9 1353 aa11.4□□□□□ -0.59
COL21A1-202ENST00000370817 USP19O94966 1318 aa11.39□□□□□ -0.59
COL21A1-202ENST00000370817 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
COL21A1-202ENST00000370817 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
COL21A1-202ENST00000370817 POLR3EQ9NVU0 708 aa11.39□□□□□ -0.59
COL21A1-202ENST00000370817 NFAT5O94916 1531 aa11.39□□□□□ -0.59
COL21A1-202ENST00000370817 ADH1CP00326 375 aa11.38□□□□□ -0.59
COL21A1-202ENST00000370817 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
COL21A1-202ENST00000370817 CDK15Q96Q40 435 aa11.38□□□□□ -0.59
COL21A1-202ENST00000370817 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
COL21A1-202ENST00000370817 SLIT2O94813 1529 aa11.38□□□□□ -0.59
COL21A1-202ENST00000370817 KTN1Q86UP2 1357 aaKnown RBP11.38□□□□□ -0.59
COL21A1-202ENST00000370817 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 TIMP2P16035 220 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
COL21A1-202ENST00000370817 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
COL21A1-202ENST00000370817 WDR4P57081 412 aaKnown RBP11.36□□□□□ -0.59
COL21A1-202ENST00000370817 ARID5BQ14865 1188 aa11.36□□□□□ -0.59
COL21A1-202ENST00000370817 AGERQ15109 404 aa11.36□□□□□ -0.59
COL21A1-202ENST00000370817 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
COL21A1-202ENST00000370817 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
COL21A1-202ENST00000370817 ABCC6O95255 1503 aa11.35□□□□□ -0.59
COL21A1-202ENST00000370817 BPHLQ86WA6 291 aaPredicted RBP11.35□□□□□ -0.59
COL21A1-202ENST00000370817 ZFP42Q96MM3 310 aa11.35□□□□□ -0.59
COL21A1-202ENST00000370817 BCL9LQ86UU0 1499 aa11.35□□□□□ -0.59
COL21A1-202ENST00000370817 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
COL21A1-202ENST00000370817 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
COL21A1-202ENST00000370817 CPDO75976 1380 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 WIPF1O43516 503 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
COL21A1-202ENST00000370817 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 FNBP4Q8N3X1 1017 aaPredicted RBP11.33□□□□□ -0.6
COL21A1-202ENST00000370817 TMC1Q8TDI8 760 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 GLI3P10071 1580 aa11.33□□□□□ -0.6
COL21A1-202ENST00000370817 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
COL21A1-202ENST00000370817 NR3C2P08235 984 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 GRM5P41594 1212 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 MRPL14Q6P1L8 145 aaKnown RBP11.32□□□□□ -0.6
COL21A1-202ENST00000370817 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 CARD14Q9BXL6 1004 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
COL21A1-202ENST00000370817 ATRNO75882 1429 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 AFF2P51816 1311 aa11.32□□□□□ -0.6
COL21A1-202ENST00000370817 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 CAMTA1Q9Y6Y1 1673 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 BRWD3Q6RI45 1802 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 NXF1Q9UBU9 619 aaKnown RBP11.31□□□□□ -0.6
COL21A1-202ENST00000370817 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 PEAK1Q9H792 1746 aa11.31□□□□□ -0.6
COL21A1-202ENST00000370817 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
COL21A1-202ENST00000370817 KIAA0232Q92628 1395 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 CTDSPL2Q05D32 466 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 NR5A1Q13285 461 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 NME9Q86XW9 330 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 C8orf37Q96NL8 207 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
COL21A1-202ENST00000370817 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
COL21A1-202ENST00000370817 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
COL21A1-202ENST00000370817 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
COL21A1-202ENST00000370817 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
COL21A1-202ENST00000370817 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
COL21A1-202ENST00000370817 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
COL21A1-202ENST00000370817 THSD7AQ9UPZ6 1657 aa11.28□□□□□ -0.6
COL21A1-202ENST00000370817 GCP02774 474 aa11.28□□□□□ -0.6
COL21A1-202ENST00000370817 SCARF1Q14162 830 aa11.28□□□□□ -0.6
COL21A1-202ENST00000370817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL21A1-202ENST00000370817 EP400Q96L91 3159 aa11.27□□□□□ -0.6
COL21A1-202ENST00000370817 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
COL21A1-202ENST00000370817 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
COL21A1-202ENST00000370817 FYB1O15117 783 aa11.27□□□□□ -0.61
COL21A1-202ENST00000370817 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
COL21A1-202ENST00000370817 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
COL21A1-202ENST00000370817 FAM117AQ9C073 453 aa11.27□□□□□ -0.61
COL21A1-202ENST00000370817 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
COL21A1-202ENST00000370817 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
COL21A1-202ENST00000370817 VEGFBP49765 207 aa11.26□□□□□ -0.61
COL21A1-202ENST00000370817 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
COL21A1-202ENST00000370817 ARHGEF25Q86VW2 580 aa11.26□□□□□ -0.61
COL21A1-202ENST00000370817 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms