RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 DYDC1Q8WWB3 177 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 INCENPQ9NQS7 918 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 TUBB4AP04350 444 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 ATP8B2P98198 1209 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 AOPEPQ8N6M6 819 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 V9GYY5 206 aaPredicted RBP19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 PTGS1P23219 599 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 DNA2P51530 1060 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 RBSNQ9H1K0 784 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 IFIT5Q13325 482 aaKnown RBP19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 KCNG4Q8TDN1 519 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 TSG101Q99816 390 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 USP26Q9BXU7 913 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 UGGT2Q9NYU1 1516 aa19.75■□□□□ 0.75
PTP4A1-201ENST00000370651 FGFR1OPO95684 399 aaKnown RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 TDRD12Q587J7 1177 aaKnown RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 RNF41Q9H4P4 317 aaPredicted RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 NPHP3Q7Z494 1330 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 IFFO1Q0D2I5 559 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 IQCA1Q86XH1 822 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 SRRTQ9BXP5 876 aaKnown RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 HAND2P61296 217 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 MAP2K1Q02750 393 aaPredicted RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 CCDC113Q9H0I3 377 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 PRDM11Q9NQV5 511 aa19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 GPATCH8Q9UKJ3 1502 aaKnown RBP19.74■□□□□ 0.75
PTP4A1-201ENST00000370651 PTCD1O75127 700 aaKnown RBP19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 IBSPP21815 317 aaPredicted RBP19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 VPS36Q86VN1 386 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 MICU3Q86XE3 530 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 ALS2CR12Q96Q35 445 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 FBLN1P23142 703 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 NAA15Q9BXJ9 866 aaKnown RBP19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 METAP2P50579 478 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 NCOA7Q8NI08 942 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 VAMP4O75379 141 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 CCDC178Q5BJE1 867 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 CEP85Q6P2H3 762 aa19.73■□□□□ 0.75
PTP4A1-201ENST00000370651 PPP1R12BO60237 982 aaPredicted RBP19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 AK2P54819 239 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 STARD3NLO95772 234 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 USP5P45974 858 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 RAB11FIP4Q86YS3 637 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 RANBP6O60518 1105 aaKnown RBP19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 N4BP3O15049 544 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 LIG1P18858 919 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 TMEM132AQ24JP5 1023 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 TMEM67Q5HYA8 995 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 LRRC2Q9BYS8 371 aa19.72■□□□□ 0.75
PTP4A1-201ENST00000370651 SYT1P21579 422 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 HLTFQ14527 1009 aaKnown RBP eCLIP19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 FEZ1Q99689 392 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 CCDC194A0A1B0GVG4 234 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 CCDC144CPQ8IYA2 1237 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 NLRP5P59047 1200 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 MCM6Q14566 821 aa19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 BCCIPQ9P287 314 aaKnown RBP eCLIP19.71■□□□□ 0.75
PTP4A1-201ENST00000370651 KLF18A0A0U1RQI7 1052 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 SPECC1Q5M775 1068 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 EHBP1Q8NDI1 1231 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 JADE2Q9NQC1 790 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 SNRKQ9NRH2 765 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 CTAGE15A4D2H0 777 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 CTAGE8P0CG41 777 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 GBP2P32456 591 aaPredicted RBP19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 CTAGE6Q86UF2 777 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 CTAGE4Q8IX94 777 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 IVLP07476 585 aa19.7■□□□□ 0.74
PTP4A1-201ENST00000370651 UBE3BQ7Z3V4 1068 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 SMAP1Q8IYB5 467 aaPredicted RBP19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 ANXA1P04083 346 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 TSPYL6Q8N831 410 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 PYM1Q9BRP8 204 aaKnown RBP19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 SLC26A6Q9BXS9 759 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 RAB34Q9BZG1 259 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 OGFRQ9NZT2 677 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 EZRP15311 586 aaKnown RBP19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 CATIPQ7Z7H3 387 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 ZFP91Q96JP5 570 aaPredicted RBP19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 ADGRL1O94910 1474 aa19.69■□□□□ 0.74
PTP4A1-201ENST00000370651 Q6ZUG5 572 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 ZNF287Q9HBT7 754 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 IGSF3O75054 1194 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 ZNF445P59923 1031 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 LMOD1P29536 600 aaPredicted RBP19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 ZNF76P36508 570 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 CHMLP26374 656 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 HSP90AA4PQ58FG1 418 aa19.68■□□□□ 0.74
PTP4A1-201ENST00000370651 MATR3P43243 847 aaKnown RBP eCLIP19.67■□□□□ 0.74
PTP4A1-201ENST00000370651 CKAP4Q07065 602 aaKnown RBP19.67■□□□□ 0.74
PTP4A1-201ENST00000370651 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.67■□□□□ 0.745e-7■■□□□ 14.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms