RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 SLU7O95391 586 aaKnown RBP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 CTNNA3Q9UI47 895 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 TPCN1Q9ULQ1 816 aa12.23□□□□□ -0.45
PRPF38B-201ENST00000370021 GLRX3O76003 335 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 FSIP1Q8NA03 581 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 CHL1O00533 1208 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 NLRP6P59044 892 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 EPC1Q9H2F5 836 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
PRPF38B-201ENST00000370021 ZNF853P0CG23 659 aa12.21□□□□□ -0.45
PRPF38B-201ENST00000370021 STK38Q15208 465 aa12.21□□□□□ -0.45
PRPF38B-201ENST00000370021 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
PRPF38B-201ENST00000370021 LMAN1P49257 510 aa12.21□□□□□ -0.45
PRPF38B-201ENST00000370021 CAMSAP1Q5T5Y3 1602 aa12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 ADGRB2O60241 1585 aa12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 GPS2Q13227 327 aa12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 BMS1Q14692 1282 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 CFAP100Q494V2 611 aa12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 ZCCHC17Q9NP64 241 aaKnown RBP12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 HYPKQ9NX55 129 aa12.21□□□□□ -0.46
PRPF38B-201ENST00000370021 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 RAD50Q92878 1312 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 GYS2P54840 703 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 NMIQ13287 307 aaPredicted RBP12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 TERF2Q15554 542 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 OTUD7BQ6GQQ9 843 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 NAT10Q9H0A0 1025 aaKnown RBP12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 USP44Q9H0E7 712 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 A0A1B0GVL5 298 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 PHACTR2O75167 634 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 ECHDC1Q9NTX5 307 aa12.2□□□□□ -0.46
PRPF38B-201ENST00000370021 SEC31AO94979 1220 aaKnown RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 C11orf57Q6ZUT1 292 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 DDX41Q9UJV9 622 aaKnown RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 LRRC8AQ8IWT6 810 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 GABPB1Q06547 395 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 MCM6Q14566 821 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
PRPF38B-201ENST00000370021 GLI2P10070 1586 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CPLX1O14810 134 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 RGS12O14924 1447 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 MYL6BP14649 208 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 ANKRD7Q92527 254 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
PRPF38B-201ENST00000370021 CARD6Q9BX69 1037 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 HNRNPH2P55795 449 aaKnown RBP12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 STX1AQ16623 288 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 Q6ZUG5 572 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 TMEM51Q9NW97 253 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 MYO5BQ9ULV0 1848 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
PRPF38B-201ENST00000370021 ANKRD65E5RJM6 399 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 IBSPP21815 317 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 SLC26A8Q96RN1 970 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 GNG11P61952 73 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
PRPF38B-201ENST00000370021 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms