RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 CHPF2Q9P2E5 772 aa26.51■■□□□ 1.83
CUEDC2-201ENST00000369937 NTSR2O95665 410 aa26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 GNAI1P63096 354 aa26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 FKBP4Q02790 459 aaKnown RBP eCLIP26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 RBM17Q96I25 401 aaKnown RBP26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 NLRP3Q96P20 1036 aa26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 MBIPQ9NS73 344 aa26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 DBF4Q9UBU7 674 aaPredicted RBP26.5■■□□□ 1.83
CUEDC2-201ENST00000369937 RIC1Q4ADV7 1423 aa26.49■■□□□ 1.83
CUEDC2-201ENST00000369937 ZNF316A6NFI3 1004 aaPredicted RBP26.49■■□□□ 1.83
CUEDC2-201ENST00000369937 DUSP27Q5VZP5 1158 aa26.48■■□□□ 1.83
CUEDC2-201ENST00000369937 SMC1BQ8NDV3 1235 aa26.48■■□□□ 1.83
CUEDC2-201ENST00000369937 IFT57Q9NWB7 429 aa26.48■■□□□ 1.83
CUEDC2-201ENST00000369937 CC2D2BQ6DHV5 1058 aa26.47■■□□□ 1.83
CUEDC2-201ENST00000369937 TMX4Q9H1E5 349 aaPredicted RBP26.47■■□□□ 1.83
CUEDC2-201ENST00000369937 RNF123Q5XPI4 1314 aa26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 DICER1Q9UPY3 1922 aaKnown RBP26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 ANP32CO43423 234 aa26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 HOXA10P31260 410 aaPredicted RBP26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 TCIRG1Q13488 830 aa26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 OLFM4Q6UX06 510 aa26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 HYPKQ9NX55 129 aa26.46■■□□□ 1.83
CUEDC2-201ENST00000369937 ZNF277Q9NRM2 450 aaPredicted RBP26.45■■□□□ 1.82
CUEDC2-201ENST00000369937 ZNF853P0CG23 659 aa26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 GRIPAP1Q4V328 841 aa26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 ANKRD13DQ6ZTN6 518 aa26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 NLRP10Q86W26 655 aa26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 CRAMP1Q96RY5 1269 aa26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 TRMT112Q9UI30 125 aaKnown RBP26.44■■□□□ 1.82
CUEDC2-201ENST00000369937 SLC10A5Q5PT55 438 aa26.43■■□□□ 1.82
CUEDC2-201ENST00000369937 SYNE4Q8N205 404 aa26.43■■□□□ 1.82
CUEDC2-201ENST00000369937 PLBD2Q8NHP8 589 aa26.43■■□□□ 1.82
CUEDC2-201ENST00000369937 CHMP4AQ9BY43 222 aa26.43■■□□□ 1.82
CUEDC2-201ENST00000369937 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
CUEDC2-201ENST00000369937 PPEF1O14829 653 aaPredicted RBP26.42■■□□□ 1.82
CUEDC2-201ENST00000369937 DDNO94850 711 aaPredicted RBP26.42■■□□□ 1.82
CUEDC2-201ENST00000369937 ELL2O00472 640 aaPredicted RBP26.41■■□□□ 1.82
CUEDC2-201ENST00000369937 IARSP41252 1262 aaKnown RBP26.41■■□□□ 1.82
CUEDC2-201ENST00000369937 CCDC184Q52MB2 194 aa26.41■■□□□ 1.82
CUEDC2-201ENST00000369937 SH3TC1Q8TE82 1336 aa26.4■■□□□ 1.82
CUEDC2-201ENST00000369937 JDP2Q8WYK2 163 aa26.4■■□□□ 1.82
CUEDC2-201ENST00000369937 PSMD1Q99460 953 aa26.4■■□□□ 1.82
CUEDC2-201ENST00000369937 MRS2Q9HD23 443 aa26.4■■□□□ 1.82
CUEDC2-201ENST00000369937 WDR90Q96KV7 1748 aa26.39■■□□□ 1.82
CUEDC2-201ENST00000369937 ANKRD36CQ5JPF3 1778 aa26.39■■□□□ 1.82
CUEDC2-201ENST00000369937 C3orf67Q6ZVT6 689 aa26.39■■□□□ 1.82
CUEDC2-201ENST00000369937 CEP350Q5VT06 3117 aa26.39■■□□□ 1.81
CUEDC2-201ENST00000369937 IQCA1LA6NCM1 817 aa26.38■■□□□ 1.81
CUEDC2-201ENST00000369937 POTECB2RU33 542 aa26.38■■□□□ 1.81
CUEDC2-201ENST00000369937 HCLS1P14317 486 aaPredicted RBP26.38■■□□□ 1.81
CUEDC2-201ENST00000369937 GOLGA2Q08379 1002 aa26.37■■□□□ 1.81
CUEDC2-201ENST00000369937 RIC3Q7Z5B4 369 aa26.37■■□□□ 1.81
CUEDC2-201ENST00000369937 DDX46Q7L014 1031 aaKnown RBP26.36■■□□□ 1.81
CUEDC2-201ENST00000369937 ATP5J2-PTCD1G3V325 749 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 BBOX1O75936 387 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 CCDC30Q5VVM6 783 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 ZNF428Q96B54 188 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 ATP6V0A2Q9Y487 856 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 ABCC4O15439 1325 aa26.34■■□□□ 1.81
CUEDC2-201ENST00000369937 CCDC27Q2M243 656 aa26.33■■□□□ 1.81
CUEDC2-201ENST00000369937 LARGE2Q8N3Y3 721 aa26.33■■□□□ 1.81
CUEDC2-201ENST00000369937 C8orf58Q8NAV2 365 aa26.33■■□□□ 1.81
CUEDC2-201ENST00000369937 ISCA1Q9BUE6 129 aa26.33■■□□□ 1.81
CUEDC2-201ENST00000369937 EIF6P56537 245 aaKnown RBP26.32■■□□□ 1.8
CUEDC2-201ENST00000369937 L3MBTL3Q96JM7 780 aaPredicted RBP26.32■■□□□ 1.8
CUEDC2-201ENST00000369937 PHAXQ9H814 394 aaKnown RBP26.32■■□□□ 1.8
CUEDC2-201ENST00000369937 ZNF541Q9H0D2 1346 aa26.32■■□□□ 1.8
CUEDC2-201ENST00000369937 FZD9O00144 591 aa26.31■■□□□ 1.8
CUEDC2-201ENST00000369937 DDX58O95786 925 aaKnown RBP26.31■■□□□ 1.8
CUEDC2-201ENST00000369937 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
CUEDC2-201ENST00000369937 SUPT20HQ8NEM7 779 aa26.31■■□□□ 1.8
CUEDC2-201ENST00000369937 FAM89AQ96GI7 184 aa26.31■■□□□ 1.8
CUEDC2-201ENST00000369937 HTRA3P83110 453 aa26.3■■□□□ 1.8
CUEDC2-201ENST00000369937 CHADLQ6NUI6 762 aa26.3■■□□□ 1.8
CUEDC2-201ENST00000369937 SNED1Q8TER0 1413 aa26.3■■□□□ 1.8
CUEDC2-201ENST00000369937 GRAPQ13588 217 aa26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 RTL5Q5HYW3 569 aaPredicted RBP26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 SP8Q8IXZ3 490 aa26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 GPC2Q8N158 579 aa26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 GRAPLQ8TC17 118 aaPredicted RBP26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 TSR2Q969E8 191 aaKnown RBP26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 STK31Q9BXU1 1019 aa26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 HACL1Q9UJ83 578 aa26.29■■□□□ 1.8
CUEDC2-201ENST00000369937 PPIP5K2O43314 1243 aa26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 HSP90B1P14625 803 aaKnown RBP26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 TRIM28Q13263 835 aaKnown RBP26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 DPP8Q6V1X1 898 aaPredicted RBP26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 NIM1KQ8IY84 436 aa26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 DNAJC5GQ8N7S2 189 aa26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 VPS33BQ9H267 617 aa26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 GJA3Q9Y6H8 435 aa26.28■■□□□ 1.8
CUEDC2-201ENST00000369937 EAPPQ56P03 285 aaPredicted RBP26.27■■□□□ 1.8
CUEDC2-201ENST00000369937 TMC4Q7Z404 712 aa26.27■■□□□ 1.8
CUEDC2-201ENST00000369937 MYD88Q99836 296 aa26.27■■□□□ 1.8
CUEDC2-201ENST00000369937 TAF1DQ9H5J8 278 aaPredicted RBP26.27■■□□□ 1.8
CUEDC2-201ENST00000369937 SCN4AP35499 1836 aa26.26■■□□□ 1.79
CUEDC2-201ENST00000369937 NCBP3Q53F19 620 aaKnown RBP26.26■■□□□ 1.79
CUEDC2-201ENST00000369937 MPNDQ8N594 471 aa26.26■■□□□ 1.79
CUEDC2-201ENST00000369937 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
CUEDC2-201ENST00000369937 IL16Q14005 1332 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms