RNA–Protein interactions for RNA: ENST00000369893.9

SFXN2-201, Transcript of sideroflexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN2, Length 6,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-201ENST00000369893 MIPOL1Q8TD10 442 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 TNPO1Q92973 898 aaKnown RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 SYNCQ9H7C4 482 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CEP120Q8N960 986 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 GJB2P29033 226 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 ISM2Q6H9L7 571 aa11.88□□□□□ -0.51
SFXN2-201ENST00000369893 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
SFXN2-201ENST00000369893 CYLC1P35663 651 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 KRT13P13646 458 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC174Q6PII3 467 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 GSTA5Q7RTV2 222 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 IDEP14735 1019 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 PRPHP41219 470 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 NUTM2BA6NNL0 878 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 NUTM2EB1AL46 878 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 CCT2P78371 535 aaKnown RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 MCM6Q14566 821 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 NUTM2AQ8IVF1 878 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 RNF41Q9H4P4 317 aaPredicted RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 IFIT3O14879 490 aaKnown RBP11.87□□□□□ -0.51
SFXN2-201ENST00000369893 CAPN2P17655 700 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 BICD1Q96G01 975 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 STIM2Q9P246 746 aa11.87□□□□□ -0.51
SFXN2-201ENST00000369893 AKR1B10O60218 316 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 RGS22Q8NE09 1264 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 FEZ2Q9UHY8 353 aaPredicted RBP11.86□□□□□ -0.51
SFXN2-201ENST00000369893 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 ATP2A1O14983 1001 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 N4BP3O15049 544 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC114Q96M63 670 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 STX6O43752 255 aa11.86□□□□□ -0.51
SFXN2-201ENST00000369893 SEC62Q99442 399 aaKnown RBP11.86□□□□□ -0.51
SFXN2-201ENST00000369893 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 EBAG9O00559 213 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 CIB2O75838 187 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 ZNF165P49910 485 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 UBASH3AP57075 661 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 GOLGA1Q92805 767 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
SFXN2-201ENST00000369893 SETDB1Q15047 1291 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SFXN2-201ENST00000369893 TACC1O75410 805 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 PPFIBP2Q8ND30 876 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 SMC1BQ8NDV3 1235 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 CCDC110Q8TBZ0 833 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 VPS18Q9P253 973 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 WDHD1O75717 1129 aaPredicted RBP11.85□□□□□ -0.51
SFXN2-201ENST00000369893 TERF1P54274 439 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 NAA25Q14CX7 972 aa11.85□□□□□ -0.51
SFXN2-201ENST00000369893 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
SFXN2-201ENST00000369893 CPLX4Q7Z7G2 160 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 SAMD15Q9P1V8 674 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 GMNNO75496 209 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 LACTBP83111 547 aaPredicted RBP11.84□□□□□ -0.51
SFXN2-201ENST00000369893 CFAP157Q5JU67 520 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 SH3BP5O60239 455 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 CAVIN2O95810 425 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
SFXN2-201ENST00000369893 TFIP11Q9UBB9 837 aaKnown RBP11.84□□□□□ -0.51
SFXN2-201ENST00000369893 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 UBE2HP62256 183 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 WDR78Q5VTH9 848 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 STMN2Q93045 179 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
SFXN2-201ENST00000369893 SLC5A1P13866 664 aa11.83□□□□□ -0.52
SFXN2-201ENST00000369893 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
SFXN2-201ENST00000369893 LMBR1Q8WVP7 490 aa11.83□□□□□ -0.52
SFXN2-201ENST00000369893 TTC36A6NLP5 189 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms