RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 H3BQV1 296 aa16.93■□□□□ 0.3
PHTF1-204ENST00000369604 ERCC6LQ2NKX8 1250 aa16.93■□□□□ 0.3
PHTF1-204ENST00000369604 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
PHTF1-204ENST00000369604 RBM8AQ9Y5S9 174 aaKnown RBP16.93■□□□□ 0.3
PHTF1-204ENST00000369604 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
PHTF1-204ENST00000369604 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
PHTF1-204ENST00000369604 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
PHTF1-204ENST00000369604 A0A087WWV3 80 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 DDX11Q96FC9 970 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 FOSBP53539 338 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 CREB3L3Q68CJ9 461 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 C11orf57Q6ZUT1 292 aaPredicted RBP16.92■□□□□ 0.3
PHTF1-204ENST00000369604 TM6SF1Q9BZW5 370 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 PSMA5P28066 241 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 CLASRPQ8N2M8 674 aaKnown RBP16.92■□□□□ 0.3
PHTF1-204ENST00000369604 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 CRB1P82279 1406 aa16.92■□□□□ 0.3
PHTF1-204ENST00000369604 POLR3GO15318 223 aaPredicted RBP16.91■□□□□ 0.3
PHTF1-204ENST00000369604 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
PHTF1-204ENST00000369604 NYAP1Q6ZVC0 841 aa16.91■□□□□ 0.3
PHTF1-204ENST00000369604 CCAR2Q8N163 923 aaKnown RBP16.91■□□□□ 0.3
PHTF1-204ENST00000369604 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
PHTF1-204ENST00000369604 CDC25BP30305 580 aa16.91■□□□□ 0.3
PHTF1-204ENST00000369604 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
PHTF1-204ENST00000369604 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
PHTF1-204ENST00000369604 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
PHTF1-204ENST00000369604 CAVIN2O95810 425 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
PHTF1-204ENST00000369604 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
PHTF1-204ENST00000369604 ZNF446Q9NWS9 450 aa16.9■□□□□ 0.3
PHTF1-204ENST00000369604 STX1AQ16623 288 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 SYT10Q6XYQ8 523 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
PHTF1-204ENST00000369604 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 HDGFL1Q5TGJ6 251 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
PHTF1-204ENST00000369604 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 HSP90B1P14625 803 aaKnown RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 ARHGAP29Q52LW3 1261 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 RBM43Q6ZSC3 357 aaKnown RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 KIF2AO00139 706 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 IQCB1Q15051 598 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 ANKRD1Q15327 319 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 TEX35Q5T0J7 233 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 FAM227BQ96M60 508 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 CCZ1BP86790 482 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 CCZ1P86791 482 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 NECTIN1Q15223 517 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
PHTF1-204ENST00000369604 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 ECHDC1Q9NTX5 307 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
PHTF1-204ENST00000369604 JAK2O60674 1132 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-204ENST00000369604 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
PHTF1-204ENST00000369604 KINO60870 393 aaKnown RBP16.87■□□□□ 0.29
PHTF1-204ENST00000369604 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
PHTF1-204ENST00000369604 SIGLEC1Q9BZZ2 1709 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 SLC27A2O14975 620 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 SMC2O95347 1197 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 TNNT3P45378 269 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-204ENST00000369604 CLCN6P51797 869 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 SARM1Q6SZW1 724 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 BRF1Q92994 677 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
PHTF1-204ENST00000369604 NRDCO43847 1150 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 CPS1P31327 1500 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 CAPN2P17655 700 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 POLA2Q14181 598 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 TMCO3Q6UWJ1 677 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 UBXN4Q92575 508 aa16.86■□□□□ 0.29
PHTF1-204ENST00000369604 ARGLU1Q9NWB6 273 aaPredicted RBP16.86■□□□□ 0.29
PHTF1-204ENST00000369604 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 CYP2C19P33261 490 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 NMIQ13287 307 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-204ENST00000369604 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-204ENST00000369604 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 LRRN4CLQ8ND94 238 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 GSDMDP57764 484 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 AACSQ86V21 672 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 MNS1Q8NEH6 495 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 NEK11Q8NG66 645 aa16.85■□□□□ 0.29
PHTF1-204ENST00000369604 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms