RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FIBPO43427 364 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 UQCRFS1P1P0C7P4 283 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 CHMLP26374 656 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 CAVIN4Q5BKX8 364 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC191Q8NCU4 936 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 SSH3Q8TE77 659 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 USP44Q9H0E7 712 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 CFAP45Q9UL16 551 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 OVOS2A0A0J9YW53 1432 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 OVOS2Q6IE36 1432 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 RRP9O43818 475 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 TRIM22Q8IYM9 498 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 USP26Q9BXU7 913 aa6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 BICC1Q9H694 974 aaKnown RBP6.29□□□□□ -1.4
SMNDC1-202ENST00000369603 KDRP35968 1356 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 GOLIM4O00461 696 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 HMGN5P82970 282 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 STK3Q13188 491 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 GCKRQ14397 625 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 DDX17Q92841 729 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 TSPY26PQ9H489 355 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 PA2G4Q9UQ80 394 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 KAT6BQ8WYB5 2073 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 PNMA6EA0A0J9YXQ4 647 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 TPM2P07951 284 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 NBPF7P0C2Y1 421 aaPredicted RBP6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 TDO2P48775 406 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC152Q4G0S7 254 aa6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 NAT10Q9H0A0 1025 aaKnown RBP6.28□□□□□ -1.4
SMNDC1-202ENST00000369603 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 UBAP1LF5GYI3 381 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 KINO60870 393 aaKnown RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC83Q8IWF9 413 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 CARD10Q9BWT7 1032 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 RAI14Q9P0K7 980 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 MARCH6O60337 910 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 ATP6V1AP38606 617 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 ATP2B3Q16720 1220 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 RRP12Q5JTH9 1297 aaKnown RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 BEND3Q5T5X7 828 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 WASF1Q92558 559 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 TMX3Q96JJ7 454 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 ZNF213O14771 459 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 TPM3P06753 285 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 FOSBP53539 338 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC173Q0VFZ6 552 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 MCMDC2Q4G0Z9 681 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 BICDL1Q6ZP65 573 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 DZIP3Q86Y13 1208 aaKnown RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 SDF4Q9BRK5 362 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 SCAND2PQ9GZW5 306 aaPredicted RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 WDR17Q8IZU2 1322 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 CPS1P31327 1500 aa6.27□□□□□ -1.41
SMNDC1-202ENST00000369603 KCNQ3O43525 872 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 SSFA2P28290 1259 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 PIP4K2AP48426 406 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 STK38Q15208 465 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 FBXW7Q969H0 707 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 NEK1Q96PY6 1258 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 UBAC1Q9BSL1 405 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 NAPBQ9H115 298 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 DNAJC5Q9H3Z4 198 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 SETD1BQ9UPS6 1966 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 ITSN1Q15811 1721 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 CEP170BQ9Y4F5 1589 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 OTUD7AQ8TE49 926 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC47Q96A33 483 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 INTS4Q96HW7 963 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 RNF41Q9H4P4 317 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 RBM8AQ9Y5S9 174 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 SPATA31A3Q5VYP0 1347 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 IBTKQ9P2D0 1353 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 NEURL1BA8MQ27 555 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC192P0DO97 292 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 SPATA32Q96LK8 384 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 UTP14AQ9BVJ6 771 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 ABCF2Q9UG63 623 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 EYA2O00167 538 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 BAG4O95429 457 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 DDX46Q7L014 1031 aaKnown RBP6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 SUCLG2Q96I99 432 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 PAG1Q9NWQ8 432 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC39Q9UFE4 941 aa6.26□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC196A0A1B0GTZ2 297 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 RBM10P98175 930 aaKnown RBP6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 TFCP2Q12800 502 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 PARP10Q53GL7 1025 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 SSH2Q76I76 1423 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 STX6O43752 255 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 XRCC6P12956 609 aaKnown RBP eCLIP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms