RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 DISP1Q96F81 1524 aa17.3■□□□□ 0.36
FAM46C-201ENST00000369448 NMIQ13287 307 aaPredicted RBP17.3■□□□□ 0.36
FAM46C-201ENST00000369448 KIAA1328Q86T90 577 aa17.3■□□□□ 0.36
FAM46C-201ENST00000369448 DENND4BO75064 1496 aaPredicted RBP17.3■□□□□ 0.36
FAM46C-201ENST00000369448 MINDY4BA8MYZ0 360 aa17.3■□□□□ 0.36
FAM46C-201ENST00000369448 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
FAM46C-201ENST00000369448 CEBPAP49715 358 aaPredicted RBP17.29■□□□□ 0.36
FAM46C-201ENST00000369448 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.36
FAM46C-201ENST00000369448 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
FAM46C-201ENST00000369448 ZBTB3Q9H5J0 574 aa17.29■□□□□ 0.36
FAM46C-201ENST00000369448 CT47A1Q5JQC4 288 aaPredicted RBP17.29■□□□□ 0.36
FAM46C-201ENST00000369448 Q6ZUG5 572 aa17.29■□□□□ 0.36
FAM46C-201ENST00000369448 LUZP1Q86V48 1076 aa17.29■□□□□ 0.36
FAM46C-201ENST00000369448 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
FAM46C-201ENST00000369448 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
FAM46C-201ENST00000369448 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
FAM46C-201ENST00000369448 IFIT5Q13325 482 aaKnown RBP17.28■□□□□ 0.36
FAM46C-201ENST00000369448 CCDC171Q6TFL3 1326 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 GOLGA8AA7E2F4 631 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
FAM46C-201ENST00000369448 DTNBO60941 627 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.36
FAM46C-201ENST00000369448 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
FAM46C-201ENST00000369448 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
FAM46C-201ENST00000369448 GRM8O00222 908 aa17.27■□□□□ 0.36
FAM46C-201ENST00000369448 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
FAM46C-201ENST00000369448 GAS2L3Q86XJ1 694 aa17.27■□□□□ 0.36
FAM46C-201ENST00000369448 ZHX3Q9H4I2 956 aa17.27■□□□□ 0.36
FAM46C-201ENST00000369448 AOPEPQ8N6M6 819 aa17.27■□□□□ 0.36
FAM46C-201ENST00000369448 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
FAM46C-201ENST00000369448 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
FAM46C-201ENST00000369448 CENPHQ9H3R5 247 aa17.27■□□□□ 0.35
FAM46C-201ENST00000369448 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.35
FAM46C-201ENST00000369448 PTPRTO14522 1441 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 IARSP41252 1262 aaKnown RBP17.26■□□□□ 0.35
FAM46C-201ENST00000369448 GNG11P61952 73 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
FAM46C-201ENST00000369448 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 IL13P35225 146 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 CCDC150Q8NCX0 1101 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 TMEM63CQ9P1W3 806 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 IGSF3O75054 1194 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 KSR2Q6VAB6 950 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
FAM46C-201ENST00000369448 LUC7LQ9NQ29 371 aaKnown RBP17.26■□□□□ 0.35
FAM46C-201ENST00000369448 KLF18A0A0U1RQI7 1052 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 ALDH1L1O75891 902 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 HSP90AA4PQ58FG1 418 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 CCDC102BQ68D86 513 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 C17orf53Q8N3J3 647 aaPredicted RBP17.26■□□□□ 0.35
FAM46C-201ENST00000369448 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
FAM46C-201ENST00000369448 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 SSRP1Q08945 709 aaKnown RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 CRACR2AQ9BSW2 395 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 CALCOCO1Q9P1Z2 691 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 NPATQ14207 1427 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 EYA1Q99502 592 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 SSBP05455 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 UBASH3AP57075 661 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 RUFY3Q7L099 469 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 DNAI1Q9UI46 699 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 KIAA0754O94854 1291 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
FAM46C-201ENST00000369448 SYKP43405 635 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 XAGE3Q8WTP9 111 aa17.25■□□□□ 0.35
FAM46C-201ENST00000369448 GOLGA6L10A6NI86 522 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 FAM173BQ6P4H8 233 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 STARD3NLO95772 234 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 NCOA7Q8NI08 942 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 PKP1Q13835 747 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 IQCEQ6IPM2 695 aa17.24■□□□□ 0.35
FAM46C-201ENST00000369448 MAP3K12Q12852 859 aa17.23■□□□□ 0.35
FAM46C-201ENST00000369448 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
FAM46C-201ENST00000369448 METAP2P50579 478 aaKnown RBP eCLIP17.23■□□□□ 0.35
FAM46C-201ENST00000369448 CHL1O00533 1208 aa17.23■□□□□ 0.35
FAM46C-201ENST00000369448 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
FAM46C-201ENST00000369448 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
FAM46C-201ENST00000369448 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
FAM46C-201ENST00000369448 TTC21AQ8NDW8 1320 aa17.23■□□□□ 0.35
FAM46C-201ENST00000369448 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
FAM46C-201ENST00000369448 KDM5CP41229 1560 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms