RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 MYD88Q99836 296 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
CDC40-202ENST00000368930 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 CCDC171Q6TFL3 1326 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 ADCK5Q3MIX3 580 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
CDC40-202ENST00000368930 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
CDC40-202ENST00000368930 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
CDC40-202ENST00000368930 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
CDC40-202ENST00000368930 SYCE3A1L190 88 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 CPA1P15085 419 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 FAM227BQ96M60 508 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 SIL1Q9H173 461 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
CDC40-202ENST00000368930 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 TTC5Q8N0Z6 440 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 JAKMIP1Q96N16 626 aaKnown RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 COL15A1P39059 1388 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 RFX5P48382 616 aaPredicted RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 USP48Q86UV5 1035 aa13.36□□□□□ -0.27
CDC40-202ENST00000368930 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 RBM8AQ9Y5S9 174 aaKnown RBP13.36□□□□□ -0.27
CDC40-202ENST00000368930 AFDNP55196 1824 aaKnown RBP13.35□□□□□ -0.27
CDC40-202ENST00000368930 STX6O43752 255 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 LARGE1O95461 756 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
CDC40-202ENST00000368930 SYT1P21579 422 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 CPDO75976 1380 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
CDC40-202ENST00000368930 GADD45BO75293 160 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 RABL6Q3YEC7 729 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 A0A0D9SFI3 127 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 CABP4P57796 275 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 FOXD4L6Q3SYB3 417 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 FOXD4L3Q6VB84 417 aaPredicted RBP13.34□□□□□ -0.27
CDC40-202ENST00000368930 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 GDPD2Q9HCC8 539 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 MED23Q9ULK4 1368 aa13.34□□□□□ -0.27
CDC40-202ENST00000368930 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
CDC40-202ENST00000368930 GLI3P10071 1580 aa13.33□□□□□ -0.28
CDC40-202ENST00000368930 SLC27A2O14975 620 aa13.33□□□□□ -0.28
CDC40-202ENST00000368930 HS1BP3Q53T59 392 aa13.33□□□□□ -0.28
CDC40-202ENST00000368930 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.28
CDC40-202ENST00000368930 JCADQ9P266 1359 aa13.33□□□□□ -0.28
CDC40-202ENST00000368930 F13A1P00488 732 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 ATP5JP18859 108 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 PSMA5P28066 241 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 ZSCAN30Q86W11 494 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 JARID2Q92833 1246 aaPredicted RBP13.32□□□□□ -0.28
CDC40-202ENST00000368930 GJB2P29033 226 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 KCNJ4P48050 445 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 CASP7P55210 303 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 ME3Q16798 604 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 TNNI3KQ59H18 835 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
CDC40-202ENST00000368930 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 FPGT-TNNI3KV9GXZ4 949 aa13.32□□□□□ -0.28
CDC40-202ENST00000368930 TFCP2Q12800 502 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 ALDH8A1Q9H2A2 487 aaPredicted RBP13.31□□□□□ -0.28
CDC40-202ENST00000368930 A0A087WZG4 1122 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 PTCD1O75127 700 aaKnown RBP13.31□□□□□ -0.28
CDC40-202ENST00000368930 PHF14O94880 888 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
CDC40-202ENST00000368930 TSPY26PQ9H489 355 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
CDC40-202ENST00000368930 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
CDC40-202ENST00000368930 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
CDC40-202ENST00000368930 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
CDC40-202ENST00000368930 ZNF589Q86UQ0 364 aaPredicted RBP13.3□□□□□ -0.28
CDC40-202ENST00000368930 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms