RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 HTRA3P83110 453 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 NEUROD2Q15784 382 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
SNX27-201ENST00000368838 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 TOMM70O94826 608 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 PRELPP51888 382 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 MCM10Q7L590 875 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
SNX27-201ENST00000368838 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.6
SNX27-201ENST00000368838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
SNX27-201ENST00000368838 MS4A1P11836 297 aa11.27□□□□□ -0.61
SNX27-201ENST00000368838 RARSP54136 660 aaKnown RBP11.27□□□□□ -0.61
SNX27-201ENST00000368838 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX27-201ENST00000368838 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
SNX27-201ENST00000368838 FMNL2Q96PY5 1086 aa11.27□□□□□ -0.61
SNX27-201ENST00000368838 CHMP4AQ9BY43 222 aa11.27□□□□□ -0.61
SNX27-201ENST00000368838 H0YIN7 160 aa11.26□□□□□ -0.61
SNX27-201ENST00000368838 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
SNX27-201ENST00000368838 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
SNX27-201ENST00000368838 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
SNX27-201ENST00000368838 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
SNX27-201ENST00000368838 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 A0A087WZG4 1122 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
SNX27-201ENST00000368838 NFKBIEO00221 500 aa11.24□□□□□ -0.61
SNX27-201ENST00000368838 NPHP1O15259 732 aa11.24□□□□□ -0.61
SNX27-201ENST00000368838 C21orf2O43822 256 aa11.24□□□□□ -0.61
SNX27-201ENST00000368838 VAMP4O75379 141 aa11.24□□□□□ -0.61
SNX27-201ENST00000368838 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
SNX27-201ENST00000368838 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
SNX27-201ENST00000368838 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
SNX27-201ENST00000368838 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
SNX27-201ENST00000368838 CAMTA2O94983 1202 aa11.23□□□□□ -0.61
SNX27-201ENST00000368838 HOXB7P09629 217 aa11.23□□□□□ -0.61
SNX27-201ENST00000368838 CHRM1P11229 460 aaPredicted RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 APLP1P51693 650 aa11.23□□□□□ -0.61
SNX27-201ENST00000368838 EXOSC9Q06265 439 aaKnown RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 TEX13AQ9BXU3 409 aaPredicted RBP11.23□□□□□ -0.61
SNX27-201ENST00000368838 LMNB1P20700 586 aa11.22□□□□□ -0.61
SNX27-201ENST00000368838 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
SNX27-201ENST00000368838 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
SNX27-201ENST00000368838 SETDB2Q96T68 719 aa11.22□□□□□ -0.61
SNX27-201ENST00000368838 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
SNX27-201ENST00000368838 PYGBP11216 843 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 PDE6BP35913 854 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
SNX27-201ENST00000368838 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
SNX27-201ENST00000368838 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
SNX27-201ENST00000368838 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
SNX27-201ENST00000368838 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
SNX27-201ENST00000368838 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
SNX27-201ENST00000368838 TAF1P21675 1872 aa11.2□□□□□ -0.62
SNX27-201ENST00000368838 ST5P78524 1137 aa11.19□□□□□ -0.62
SNX27-201ENST00000368838 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
SNX27-201ENST00000368838 NBPF5PQ86XG9 351 aaPredicted RBP11.19□□□□□ -0.62
SNX27-201ENST00000368838 LAMB2P55268 1798 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 GLTPD2A6NH11 291 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 HLFQ16534 295 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
SNX27-201ENST00000368838 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 ZKSCAN2Q63HK3 967 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 PRPF40BQ6NWY9 871 aaKnown RBP11.18□□□□□ -0.62
SNX27-201ENST00000368838 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 NIP7Q9Y221 180 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX27-201ENST00000368838 ANKRD36CQ5JPF3 1778 aa11.18□□□□□ -0.62
SNX27-201ENST00000368838 SCN4AP35499 1836 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 PCNTO95613 3336 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 POTECB2RU33 542 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 BCAR3O75815 825 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 SRGNP10124 158 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 VEGFAP15692 232 aaPredicted RBP11.17□□□□□ -0.62
SNX27-201ENST00000368838 FSTL1Q12841 308 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 SMC1BQ8NDV3 1235 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
SNX27-201ENST00000368838 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
SNX27-201ENST00000368838 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
SNX27-201ENST00000368838 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
SNX27-201ENST00000368838 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
SNX27-201ENST00000368838 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
SNX27-201ENST00000368838 C8orf58Q8NAV2 365 aa11.16□□□□□ -0.62
SNX27-201ENST00000368838 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
SNX27-201ENST00000368838 MASTLQ96GX5 879 aa11.16□□□□□ -0.62
SNX27-201ENST00000368838 PTPRCP08575 1304 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms