RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 RGS17Q9UGC6 210 aaPredicted RBP24.06■■□□□ 1.44
CHTOP-204ENST00000368694 RAB11FIP3O75154 756 aa24.05■■□□□ 1.44
CHTOP-204ENST00000368694 CAMTA2O94983 1202 aa24.05■■□□□ 1.44
CHTOP-204ENST00000368694 HSP90AB4PQ58FF6 505 aa24.05■■□□□ 1.44
CHTOP-204ENST00000368694 NLRP10Q86W26 655 aa24.05■■□□□ 1.44
CHTOP-204ENST00000368694 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
CHTOP-204ENST00000368694 C4BP0C0L5 1744 aa24.05■■□□□ 1.44
CHTOP-204ENST00000368694 GNPATO15228 680 aa24.04■■□□□ 1.44
CHTOP-204ENST00000368694 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
CHTOP-204ENST00000368694 PCCAP05165 728 aaPredicted RBP24.03■■□□□ 1.44
CHTOP-204ENST00000368694 RABL6Q3YEC7 729 aaPredicted RBP24.03■■□□□ 1.44
CHTOP-204ENST00000368694 C8orf34Q49A92 452 aa24.03■■□□□ 1.44
CHTOP-204ENST00000368694 ZBTB38Q8NAP3 1195 aaPredicted RBP24.03■■□□□ 1.44
CHTOP-204ENST00000368694 FAM89AQ96GI7 184 aa24.03■■□□□ 1.44
CHTOP-204ENST00000368694 CHMP3Q9Y3E7 222 aa24.03■■□□□ 1.44
CHTOP-204ENST00000368694 POTEAQ6S8J7 498 aa24.03■■□□□ 1.44
CHTOP-204ENST00000368694 LMBR1LQ6UX01 489 aa24.02■■□□□ 1.44
CHTOP-204ENST00000368694 ZNF652Q9Y2D9 606 aa24.02■■□□□ 1.44
CHTOP-204ENST00000368694 NOP58Q9Y2X3 529 aaKnown RBP24.02■■□□□ 1.44
CHTOP-204ENST00000368694 FOXO4P98177 505 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 PLEKHM2Q8IWE5 1019 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 OTUD7AQ8TE49 926 aaPredicted RBP24.01■■□□□ 1.43
CHTOP-204ENST00000368694 KIF1BPQ96EK5 621 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 UBN2Q6ZU65 1347 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 RPS6KA4O75676 772 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 RHPN1Q8TCX5 695 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 IL1RAPL2Q9NP60 686 aa24.01■■□□□ 1.43
CHTOP-204ENST00000368694 RTCBQ9Y3I0 505 aaKnown RBP24.01■■□□□ 1.43
CHTOP-204ENST00000368694 SCN7AQ01118 1682 aa24■■□□□ 1.43
CHTOP-204ENST00000368694 SMIM5Q71RC9 77 aa24■■□□□ 1.43
CHTOP-204ENST00000368694 LRRC4BQ9NT99 713 aa24■■□□□ 1.43
CHTOP-204ENST00000368694 TRMT112Q9UI30 125 aaKnown RBP24■■□□□ 1.43
CHTOP-204ENST00000368694 MSH5O43196 834 aa23.99■■□□□ 1.43
CHTOP-204ENST00000368694 KLHDC4Q8TBB5 520 aa23.99■■□□□ 1.43
CHTOP-204ENST00000368694 AK7Q96M32 723 aa23.99■■□□□ 1.43
CHTOP-204ENST00000368694 SIL1Q9H173 461 aa23.99■■□□□ 1.43
CHTOP-204ENST00000368694 G3BP1Q13283 466 aaKnown RBP eCLIP23.99■■□□□ 1.43
CHTOP-204ENST00000368694 MYH3P11055 1940 aa23.98■■□□□ 1.43
CHTOP-204ENST00000368694 ERC1Q8IUD2 1116 aa23.98■■□□□ 1.43
CHTOP-204ENST00000368694 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHTOP-204ENST00000368694 SLC27A3Q5K4L6 730 aa23.98■■□□□ 1.43
CHTOP-204ENST00000368694 CDHR2Q9BYE9 1310 aa23.97■■□□□ 1.43
CHTOP-204ENST00000368694 FAM177BA6PVY3 158 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 BMP2KLQ5H9B9 411 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 SYNE4Q8N205 404 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 PARP10Q53GL7 1025 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
CHTOP-204ENST00000368694 PHF14O94880 888 aa23.95■■□□□ 1.42
CHTOP-204ENST00000368694 RFX5P48382 616 aaPredicted RBP23.95■■□□□ 1.42
CHTOP-204ENST00000368694 PTPN12Q05209 780 aaKnown RBP23.95■■□□□ 1.42
CHTOP-204ENST00000368694 COPRSQ9NQ92 184 aa23.95■■□□□ 1.42
CHTOP-204ENST00000368694 ZPR1O75312 459 aa23.95■■□□□ 1.42
CHTOP-204ENST00000368694 SUSD4Q5VX71 490 aa23.95■■□□□ 1.42
CHTOP-204ENST00000368694 PLA2G12BQ9BX93 195 aa23.95■■□□□ 1.42
CHTOP-204ENST00000368694 IRS4O14654 1257 aaPredicted RBP23.94■■□□□ 1.42
CHTOP-204ENST00000368694 MX1P20591 662 aa23.94■■□□□ 1.42
CHTOP-204ENST00000368694 NARFQ9UHQ1 456 aa23.94■■□□□ 1.42
CHTOP-204ENST00000368694 APBA3O96018 575 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 PDE1AP54750 535 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 TTC22Q5TAA0 569 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 USPL1Q5W0Q7 1092 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 AMIGO3Q86WK7 504 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 UTP14AQ9BVJ6 771 aaKnown RBP23.93■■□□□ 1.42
CHTOP-204ENST00000368694 UBR3Q6ZT12 1888 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 NUTM1Q86Y26 1132 aa23.93■■□□□ 1.42
CHTOP-204ENST00000368694 CLASRPQ8N2M8 674 aaKnown RBP23.93■■□□□ 1.42
CHTOP-204ENST00000368694 ARHGEF1Q92888 912 aaKnown RBP23.93■■□□□ 1.42
CHTOP-204ENST00000368694 SRP68Q9UHB9 627 aaKnown RBP23.93■■□□□ 1.42
CHTOP-204ENST00000368694 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
CHTOP-204ENST00000368694 TXNRD1Q16881 649 aa23.92■■□□□ 1.42
CHTOP-204ENST00000368694 CCDC85AQ96PX6 553 aaPredicted RBP23.92■■□□□ 1.42
CHTOP-204ENST00000368694 SALL3Q9BXA9 1300 aa23.92■■□□□ 1.42
CHTOP-204ENST00000368694 SASH1O94885 1247 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 GSPT1P15170 499 aaKnown RBP23.91■■□□□ 1.42
CHTOP-204ENST00000368694 CCDC57Q2TAC2 916 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 TRAPPC3LQ5T215 181 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 RFC4P35249 363 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 TSHZ3Q63HK5 1081 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 OSBPL3Q9H4L5 887 aa23.91■■□□□ 1.42
CHTOP-204ENST00000368694 TNS1Q9HBL0 1735 aaKnown RBP23.91■■□□□ 1.42
CHTOP-204ENST00000368694 BICDL1Q6ZP65 573 aa23.9■■□□□ 1.42
CHTOP-204ENST00000368694 RGL2O15211 777 aa23.9■■□□□ 1.42
CHTOP-204ENST00000368694 PDE8AO60658 829 aa23.9■■□□□ 1.42
CHTOP-204ENST00000368694 CTSWP56202 376 aa23.9■■□□□ 1.42
CHTOP-204ENST00000368694 PLSCR1O15162 318 aa23.89■■□□□ 1.41
CHTOP-204ENST00000368694 BCL2L12Q9HB09 334 aa23.89■■□□□ 1.41
CHTOP-204ENST00000368694 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
CHTOP-204ENST00000368694 LAMB2P55268 1798 aa23.89■■□□□ 1.41
CHTOP-204ENST00000368694 NTSR2O95665 410 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 CSF1RP07333 972 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 PROM2Q8N271 834 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 IFIT2P09913 472 aaKnown RBP23.88■■□□□ 1.41
CHTOP-204ENST00000368694 HMGB2P26583 209 aaKnown RBP23.88■■□□□ 1.41
CHTOP-204ENST00000368694 IFIT5Q13325 482 aaKnown RBP23.88■■□□□ 1.41
CHTOP-204ENST00000368694 TAF7LQ5H9L4 462 aa23.88■■□□□ 1.41
CHTOP-204ENST00000368694 ZNF594Q96JF6 807 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms