RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 NECTIN1Q15223 517 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 EDC3Q96F86 508 aaKnown RBP21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 FSD1Q9BTV5 496 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 CNPY2Q9Y2B0 182 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 CYP46A1Q9Y6A2 500 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 CCDC171Q6TFL3 1326 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 STX6O43752 255 aa21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 PTCD1O75127 700 aaKnown RBP21.74■■□□□ 1.07
UBQLN4-201ENST00000368309 ZSCAN22P10073 491 aaPredicted RBP21.73■■□□□ 1.07
UBQLN4-201ENST00000368309 A0A0D9SFI3 127 aa21.73■■□□□ 1.07
UBQLN4-201ENST00000368309 SNRPA1P09661 255 aaKnown RBP21.73■■□□□ 1.07
UBQLN4-201ENST00000368309 ZSWIM6Q9HCJ5 1215 aa21.73■■□□□ 1.07
UBQLN4-201ENST00000368309 ZKSCAN1P17029 563 aaPredicted RBP21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 CREB3L3Q68CJ9 461 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 NECAB1Q8N987 351 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 MEGF6O75095 1541 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 VPS53Q5VIR6 699 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 UBE3BQ7Z3V4 1068 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 NDUFB9Q9Y6M9 179 aa21.72■■□□□ 1.07
UBQLN4-201ENST00000368309 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
UBQLN4-201ENST00000368309 GJB2P29033 226 aa21.71■■□□□ 1.07
UBQLN4-201ENST00000368309 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
UBQLN4-201ENST00000368309 MAP4K1Q92918 833 aa21.71■■□□□ 1.07
UBQLN4-201ENST00000368309 ME3Q16798 604 aa21.7■■□□□ 1.06
UBQLN4-201ENST00000368309 LRP10Q7Z4F1 713 aa21.7■■□□□ 1.06
UBQLN4-201ENST00000368309 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
UBQLN4-201ENST00000368309 TAF6LQ9Y6J9 622 aa21.7■■□□□ 1.06
UBQLN4-201ENST00000368309 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
UBQLN4-201ENST00000368309 ZSCAN30Q86W11 494 aa21.69■■□□□ 1.06
UBQLN4-201ENST00000368309 CABP4P57796 275 aa21.69■■□□□ 1.06
UBQLN4-201ENST00000368309 CCDC9Q9Y3X0 531 aaKnown RBP21.69■■□□□ 1.06
UBQLN4-201ENST00000368309 FMNL2Q96PY5 1086 aa21.69■■□□□ 1.06
UBQLN4-201ENST00000368309 TM6SF1Q9BZW5 370 aa21.69■■□□□ 1.06
UBQLN4-201ENST00000368309 SLC27A2O14975 620 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 FIBPO43427 364 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 TFCP2Q12800 502 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 KCNB2Q92953 911 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 ADAMTSL3P82987 1691 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 HIP1O00291 1037 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 F13A1P00488 732 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 ZNF589Q86UQ0 364 aaPredicted RBP21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 SYAP1Q96A49 352 aaPredicted RBP21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 A0A087WZG4 1122 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 TPCN1Q9ULQ1 816 aa21.68■■□□□ 1.06
UBQLN4-201ENST00000368309 CHGBP05060 677 aa21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 ST3GAL1Q11201 340 aa21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 PDLIM2Q96JY6 352 aa21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 TSPY26PQ9H489 355 aa21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 DBNLQ9UJU6 430 aaKnown RBP21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 SIPA1L3O60292 1781 aaPredicted RBP21.67■■□□□ 1.06
UBQLN4-201ENST00000368309 TCHHQ07283 1943 aa21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 MSNP26038 577 aaKnown RBP21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 ZSCAN31Q96LW9 406 aaPredicted RBP21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 CAMTA1Q9Y6Y1 1673 aa21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 VPS37CA5D8V6 355 aaPredicted RBP21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 COPRSQ9NQ92 184 aa21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 CRYBG1Q9Y4K1 1723 aa21.66■■□□□ 1.06
UBQLN4-201ENST00000368309 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
UBQLN4-201ENST00000368309 DNM1Q05193 864 aaKnown RBP21.65■■□□□ 1.06
UBQLN4-201ENST00000368309 SH2B1Q9NRF2 756 aaPredicted RBP21.65■■□□□ 1.06
UBQLN4-201ENST00000368309 MTMR6Q9Y217 621 aa21.65■■□□□ 1.06
UBQLN4-201ENST00000368309 MST1RQ04912 1400 aa21.65■■□□□ 1.06
UBQLN4-201ENST00000368309 TNNI3KQ59H18 835 aa21.64■■□□□ 1.06
UBQLN4-201ENST00000368309 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.06
UBQLN4-201ENST00000368309 FPGT-TNNI3KV9GXZ4 949 aa21.64■■□□□ 1.06
UBQLN4-201ENST00000368309 DNAJC2Q99543 621 aaKnown RBP21.64■■□□□ 1.05
UBQLN4-201ENST00000368309 DBNDD2Q9BQY9 259 aa21.63■■□□□ 1.05
UBQLN4-201ENST00000368309 BLOC1S2Q6QNY1 142 aa21.63■■□□□ 1.05
UBQLN4-201ENST00000368309 TMEM87AQ8NBN3 555 aa21.63■■□□□ 1.05
UBQLN4-201ENST00000368309 C5P01031 1676 aa21.63■■□□□ 1.05
UBQLN4-201ENST00000368309 PSMA5P28066 241 aa21.62■■□□□ 1.05
UBQLN4-201ENST00000368309 LMBR1LQ6UX01 489 aa21.62■■□□□ 1.05
UBQLN4-201ENST00000368309 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
UBQLN4-201ENST00000368309 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
UBQLN4-201ENST00000368309 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 CCDC129Q6ZRS4 1044 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 SEC62Q99442 399 aaKnown RBP21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 TAF5LO75529 589 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 PHF14O94880 888 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 UBE2HP62256 183 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 STK3Q13188 491 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 FERMT3Q86UX7 667 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 SNRKQ9NRH2 765 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 ATP5JP18859 108 aa21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 LARP1BQ659C4 914 aaKnown RBP21.61■■□□□ 1.05
UBQLN4-201ENST00000368309 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 NBPF14Q5TI25 921 aa21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 ALS2Q96Q42 1657 aa21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 RABL6Q3YEC7 729 aaPredicted RBP21.6■■□□□ 1.05
UBQLN4-201ENST00000368309 FAM173BQ6P4H8 233 aa21.59■■□□□ 1.05
UBQLN4-201ENST00000368309 TTLL7Q6ZT98 887 aa21.59■■□□□ 1.05
UBQLN4-201ENST00000368309 DDX46Q7L014 1031 aaKnown RBP21.59■■□□□ 1.05
UBQLN4-201ENST00000368309 CADPS2Q86UW7 1296 aa21.59■■□□□ 1.05
UBQLN4-201ENST00000368309 PLBD2Q8NHP8 589 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 874.7 ms