RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 CASP7P55210 303 aa21.93■■□□□ 1.1
LMNA-207ENST00000368301 EVI5LQ96CN4 794 aa21.93■■□□□ 1.1
LMNA-207ENST00000368301 FAM227BQ96M60 508 aa21.93■■□□□ 1.1
LMNA-207ENST00000368301 LARP6Q9BRS8 491 aaKnown RBP21.93■■□□□ 1.1
LMNA-207ENST00000368301 ERVV-2B6SEH9 535 aa21.92■■□□□ 1.1
LMNA-207ENST00000368301 CPA1P15085 419 aa21.92■■□□□ 1.1
LMNA-207ENST00000368301 GOLGA6L22H0YM25 854 aa21.92■■□□□ 1.1
LMNA-207ENST00000368301 SKOR2Q2VWA4 1001 aaPredicted RBP21.92■■□□□ 1.1
LMNA-207ENST00000368301 GAS2L3Q86XJ1 694 aa21.92■■□□□ 1.1
LMNA-207ENST00000368301 UBR2Q8IWV8 1755 aa21.92■■□□□ 1.1
LMNA-207ENST00000368301 NKX1-1Q15270 411 aaPredicted RBP21.91■■□□□ 1.1
LMNA-207ENST00000368301 RABL6Q3YEC7 729 aaPredicted RBP21.91■■□□□ 1.1
LMNA-207ENST00000368301 COPRSQ9NQ92 184 aa21.91■■□□□ 1.1
LMNA-207ENST00000368301 EVA1CP58658 441 aa21.91■■□□□ 1.1
LMNA-207ENST00000368301 EDC3Q96F86 508 aaKnown RBP21.91■■□□□ 1.1
LMNA-207ENST00000368301 TFCP2Q12800 502 aa21.9■■□□□ 1.1
LMNA-207ENST00000368301 LMBRD1Q9NUN5 540 aa21.9■■□□□ 1.1
LMNA-207ENST00000368301 PTMSP20962 102 aa21.9■■□□□ 1.1
LMNA-207ENST00000368301 NMIQ13287 307 aaPredicted RBP21.9■■□□□ 1.1
LMNA-207ENST00000368301 TTC14Q96N46 770 aa21.9■■□□□ 1.1
LMNA-207ENST00000368301 RUFY2Q8WXA3 655 aa21.89■■□□□ 1.1
LMNA-207ENST00000368301 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.1
LMNA-207ENST00000368301 DDX49Q9Y6V7 483 aaKnown RBP21.89■■□□□ 1.1
LMNA-207ENST00000368301 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
LMNA-207ENST00000368301 DBNLQ9UJU6 430 aaKnown RBP21.89■■□□□ 1.09
LMNA-207ENST00000368301 ADCK5Q3MIX3 580 aa21.88■■□□□ 1.09
LMNA-207ENST00000368301 LMBR1LQ6UX01 489 aa21.88■■□□□ 1.09
LMNA-207ENST00000368301 NDUFB9Q9Y6M9 179 aa21.88■■□□□ 1.09
LMNA-207ENST00000368301 PAPPAQ13219 1627 aa21.88■■□□□ 1.09
LMNA-207ENST00000368301 AK2P54819 239 aa21.88■■□□□ 1.09
LMNA-207ENST00000368301 TOGARAM1Q9Y4F4 1720 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 A0A0D9SFI3 127 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 FOXO4P98177 505 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 INTS4Q96HW7 963 aaKnown RBP21.87■■□□□ 1.09
LMNA-207ENST00000368301 KLHL40Q2TBA0 621 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 TNNI3KQ59H18 835 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 RUFY3Q7L099 469 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 FPGT-TNNI3KV9GXZ4 949 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 ERBB4Q15303 1308 aa21.87■■□□□ 1.09
LMNA-207ENST00000368301 NUP188Q5SRE5 1749 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 CASTP20810 708 aaKnown RBP21.86■■□□□ 1.09
LMNA-207ENST00000368301 FSD1Q9BTV5 496 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 CCDC171Q6TFL3 1326 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 COL15A1P39059 1388 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 H7C1W4 665 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
LMNA-207ENST00000368301 BRD1O95696 1058 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 COL9A3Q14050 684 aaPredicted RBP21.86■■□□□ 1.09
LMNA-207ENST00000368301 GRPEL1Q9HAV7 217 aa21.86■■□□□ 1.09
LMNA-207ENST00000368301 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
LMNA-207ENST00000368301 DTNBO60941 627 aa21.85■■□□□ 1.09
LMNA-207ENST00000368301 NHSL1Q5SYE7 1610 aa21.85■■□□□ 1.09
LMNA-207ENST00000368301 CHGBP05060 677 aa21.84■■□□□ 1.09
LMNA-207ENST00000368301 NECTIN1Q15223 517 aa21.84■■□□□ 1.09
LMNA-207ENST00000368301 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
LMNA-207ENST00000368301 CWC25Q9NXE8 425 aaPredicted RBP21.84■■□□□ 1.09
LMNA-207ENST00000368301 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
LMNA-207ENST00000368301 TJP1Q07157 1748 aa21.84■■□□□ 1.09
LMNA-207ENST00000368301 MRE11P49959 708 aa21.84■■□□□ 1.09
LMNA-207ENST00000368301 JAKMIP1Q96N16 626 aaKnown RBP21.84■■□□□ 1.09
LMNA-207ENST00000368301 CCDC9Q9Y3X0 531 aaKnown RBP21.84■■□□□ 1.09
LMNA-207ENST00000368301 LARGE1O95461 756 aa21.83■■□□□ 1.09
LMNA-207ENST00000368301 NCLP19338 710 aaKnown RBP21.83■■□□□ 1.09
LMNA-207ENST00000368301 BTG4Q9NY30 223 aa21.83■■□□□ 1.09
LMNA-207ENST00000368301 ZNF589Q86UQ0 364 aaPredicted RBP21.83■■□□□ 1.08
LMNA-207ENST00000368301 ASAP1Q9ULH1 1129 aa21.83■■□□□ 1.08
LMNA-207ENST00000368301 GPT2Q8TD30 523 aa21.82■■□□□ 1.08
LMNA-207ENST00000368301 KCNB2Q92953 911 aa21.82■■□□□ 1.08
LMNA-207ENST00000368301 ZNF330Q9Y3S2 320 aaPredicted RBP21.82■■□□□ 1.08
LMNA-207ENST00000368301 FOXD4L6Q3SYB3 417 aaPredicted RBP21.82■■□□□ 1.08
LMNA-207ENST00000368301 FOXD4L3Q6VB84 417 aaPredicted RBP21.82■■□□□ 1.08
LMNA-207ENST00000368301 TMOD3Q9NYL9 352 aa21.82■■□□□ 1.08
LMNA-207ENST00000368301 TAF6LQ9Y6J9 622 aa21.82■■□□□ 1.08
LMNA-207ENST00000368301 ATP5JP18859 108 aa21.81■■□□□ 1.08
LMNA-207ENST00000368301 CREB3L3Q68CJ9 461 aa21.81■■□□□ 1.08
LMNA-207ENST00000368301 CAVIN1Q6NZI2 390 aaKnown RBP21.81■■□□□ 1.08
LMNA-207ENST00000368301 MAP4K1Q92918 833 aa21.81■■□□□ 1.08
LMNA-207ENST00000368301 PIGBQ92521 554 aa21.81■■□□□ 1.08
LMNA-207ENST00000368301 MED23Q9ULK4 1368 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 HIP1O00291 1037 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 ATG9AQ7Z3C6 839 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 ZNF594Q96JF6 807 aaPredicted RBP21.8■■□□□ 1.08
LMNA-207ENST00000368301 NSFL1CQ9UNZ2 370 aaKnown RBP21.8■■□□□ 1.08
LMNA-207ENST00000368301 LIMCH1Q9UPQ0 1083 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
LMNA-207ENST00000368301 KCNJ4P48050 445 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 ZSWIM6Q9HCJ5 1215 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 SNRKQ9NRH2 765 aa21.8■■□□□ 1.08
LMNA-207ENST00000368301 RBM27Q9P2N5 1060 aaKnown RBP21.8■■□□□ 1.08
LMNA-207ENST00000368301 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
LMNA-207ENST00000368301 DNAJC2Q99543 621 aaKnown RBP21.79■■□□□ 1.08
LMNA-207ENST00000368301 SLC27A2O14975 620 aa21.79■■□□□ 1.08
LMNA-207ENST00000368301 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
LMNA-207ENST00000368301 LRRC24Q50LG9 513 aa21.78■■□□□ 1.08
LMNA-207ENST00000368301 CCDC191Q8NCU4 936 aa21.78■■□□□ 1.08
LMNA-207ENST00000368301 ATG3Q9NT62 314 aa21.77■■□□□ 1.07
LMNA-207ENST00000368301 CYP46A1Q9Y6A2 500 aa21.77■■□□□ 1.07
LMNA-207ENST00000368301 TIMM10P62072 90 aa21.76■■□□□ 1.07
LMNA-207ENST00000368301 VPS53Q5VIR6 699 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms