RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 IRAK1P51617 712 aa7.65□□□□□ -1.18
ECHDC1-201ENST00000368287 EPHA4P54764 986 aa7.65□□□□□ -1.18
ECHDC1-201ENST00000368287 PRR23CQ6ZRP0 262 aa7.65□□□□□ -1.18
ECHDC1-201ENST00000368287 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
ECHDC1-201ENST00000368287 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
ECHDC1-201ENST00000368287 DTWD1Q8N5C7 304 aa7.64□□□□□ -1.19
ECHDC1-201ENST00000368287 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-201ENST00000368287 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
ECHDC1-201ENST00000368287 MSL1Q68DK7 614 aa7.63□□□□□ -1.19
ECHDC1-201ENST00000368287 FBXO11Q86XK2 927 aa7.63□□□□□ -1.19
ECHDC1-201ENST00000368287 MEGF10Q96KG7 1140 aa7.63□□□□□ -1.19
ECHDC1-201ENST00000368287 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
ECHDC1-201ENST00000368287 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 SOX11P35716 441 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 PSMA6P60900 246 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 WASHC4Q2M389 1173 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 ILDR2Q71H61 639 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 ZNF280CQ8ND82 737 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 SUSD3Q96L08 255 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 PHACTR1Q9C0D0 580 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 EFCC1Q9HA90 598 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 HCN4Q9Y3Q4 1203 aa7.62□□□□□ -1.19
ECHDC1-201ENST00000368287 SKIP12755 728 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 FSTP19883 344 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 ABL2P42684 1182 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 LCE1DQ5T752 114 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 SLC51AQ86UW1 340 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
ECHDC1-201ENST00000368287 LZTS3O60299 673 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-201ENST00000368287 CD97P48960 835 aa7.59□□□□□ -1.19
ECHDC1-201ENST00000368287 HIRAP54198 1017 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-201ENST00000368287 IGF2-ASQ6U949 168 aa7.59□□□□□ -1.19
ECHDC1-201ENST00000368287 GDPD2Q9HCC8 539 aa7.59□□□□□ -1.19
ECHDC1-201ENST00000368287 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-201ENST00000368287 TAL1P17542 331 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 NCOA4Q13772 614 aa7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 FAM35AQ86V20 835 aa7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 WFDC8Q8IUA0 241 aa7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 TSPAN10Q9H1Z9 355 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
ECHDC1-201ENST00000368287 CPB1P15086 417 aa7.57□□□□□ -1.2
ECHDC1-201ENST00000368287 NFKB1P19838 968 aa7.57□□□□□ -1.2
ECHDC1-201ENST00000368287 PCSK7Q16549 785 aa7.56□□□□□ -1.2
ECHDC1-201ENST00000368287 HIF1AQ16665 826 aa7.56□□□□□ -1.2
ECHDC1-201ENST00000368287 GSX2Q9BZM3 304 aa7.56□□□□□ -1.2
ECHDC1-201ENST00000368287 OAS3Q9Y6K5 1087 aaKnown RBP7.56□□□□□ -1.2
ECHDC1-201ENST00000368287 PTCD1O75127 700 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 GP2P55259 537 aaKnown RBP7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 FZD5Q13467 585 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 CCINQ13939 588 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 GRIK5Q16478 980 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 FRRS1LQ9P0K9 344 aa7.55□□□□□ -1.2
ECHDC1-201ENST00000368287 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-201ENST00000368287 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
ECHDC1-201ENST00000368287 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
ECHDC1-201ENST00000368287 DZIP1LQ8IYY4 767 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-201ENST00000368287 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
ECHDC1-201ENST00000368287 ALDH16A1Q8IZ83 802 aa7.53□□□□□ -1.2
ECHDC1-201ENST00000368287 DEPDC4Q8N2C3 294 aa7.53□□□□□ -1.2
ECHDC1-201ENST00000368287 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
ECHDC1-201ENST00000368287 KIAA1324LA8MWY0 1029 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-201ENST00000368287 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-201ENST00000368287 DEAF1O75398 565 aaPredicted RBP7.52□□□□□ -1.21
ECHDC1-201ENST00000368287 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 GSC2O15499 205 aa7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 ALX3O95076 343 aa7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 PLAURQ03405 335 aa7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 MRPL18Q9H0U6 180 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 KIAA1024Q9UPX6 916 aa7.51□□□□□ -1.21
ECHDC1-201ENST00000368287 DLL1O00548 723 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 MED26O95402 600 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 TGFB1P01137 390 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 ATP1A2P50993 1020 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 CCDC102BQ68D86 513 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 TTC9Q92623 222 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
ECHDC1-201ENST00000368287 F8W735 103 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 EPB42P16452 691 aa7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 MLLT1Q03111 559 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 IER5Q5VY09 327 aa7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 DHX32Q7L7V1 743 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 RAXQ9Y2V3 346 aa7.49□□□□□ -1.21
ECHDC1-201ENST00000368287 ZBTB7BO15156 539 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 MAP3K6O95382 1288 aa7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 KRT25Q7Z3Z0 450 aa7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 TMEM130Q8N3G9 435 aa7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 SMG9Q9H0W8 520 aaKnown RBP7.48□□□□□ -1.21
ECHDC1-201ENST00000368287 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
ECHDC1-201ENST00000368287 M0R2N6 131 aa7.47□□□□□ -1.21
ECHDC1-201ENST00000368287 TGFBR3LH3BV60 316 aa7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 GLB1P16278 677 aa7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 CLDN10P78369 228 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms