RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
USF1-201ENST00000368019 APLP1P51693 650 aa14.23□□□□□ -0.13
USF1-201ENST00000368019 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
USF1-201ENST00000368019 RAB3GAP1Q15042 981 aa14.23□□□□□ -0.13
USF1-201ENST00000368019 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
USF1-201ENST00000368019 IL17REQ8NFR9 667 aa14.23□□□□□ -0.13
USF1-201ENST00000368019 ANKRD31Q8N7Z5 1873 aa14.23□□□□□ -0.13
USF1-201ENST00000368019 SERPINB2P05120 415 aa14.22□□□□□ -0.13
USF1-201ENST00000368019 CHD1LQ86WJ1 897 aa14.22□□□□□ -0.13
USF1-201ENST00000368019 RBM46Q8TBY0 533 aaKnown RBP14.22□□□□□ -0.13
USF1-201ENST00000368019 GRPEL1Q9HAV7 217 aa14.22□□□□□ -0.13
USF1-201ENST00000368019 NOB1Q9ULX3 412 aaKnown RBP14.22□□□□□ -0.13
USF1-201ENST00000368019 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
USF1-201ENST00000368019 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
USF1-201ENST00000368019 ZNF496Q96IT1 587 aaPredicted RBP14.21□□□□□ -0.13
USF1-201ENST00000368019 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
USF1-201ENST00000368019 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
USF1-201ENST00000368019 STARD3NLO95772 234 aa14.2□□□□□ -0.14
USF1-201ENST00000368019 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
USF1-201ENST00000368019 HEG1Q9ULI3 1381 aa14.2□□□□□ -0.14
USF1-201ENST00000368019 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 PRELPP51888 382 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 RIPK4P57078 832 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 ZNF790Q6PG37 636 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 GAS2L2Q8NHY3 880 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 CARMIL3Q8ND23 1372 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 CEMIPQ8WUJ3 1361 aa14.19□□□□□ -0.14
USF1-201ENST00000368019 DICER1Q9UPY3 1922 aaKnown RBP14.19□□□□□ -0.14
USF1-201ENST00000368019 ABCC4O15439 1325 aa14.18□□□□□ -0.14
USF1-201ENST00000368019 ZC3H4Q9UPT8 1303 aaKnown RBP14.18□□□□□ -0.14
USF1-201ENST00000368019 A0A087WZG4 1122 aa14.18□□□□□ -0.14
USF1-201ENST00000368019 U2SURPO15042 1029 aaKnown RBP14.18□□□□□ -0.14
USF1-201ENST00000368019 FSTL1Q12841 308 aa14.18□□□□□ -0.14
USF1-201ENST00000368019 TTC5Q8N0Z6 440 aa14.18□□□□□ -0.14
USF1-201ENST00000368019 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
USF1-201ENST00000368019 FER1L6Q2WGJ9 1857 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 K7ELQ4 463 aaPredicted RBP14.17□□□□□ -0.14
USF1-201ENST00000368019 RASSF7Q02833 373 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 TEFQ10587 303 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 TTLL6Q8N841 843 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 RRAGCQ9HB90 399 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
USF1-201ENST00000368019 COL11A2P13942 1736 aaPredicted RBP14.16□□□□□ -0.14
USF1-201ENST00000368019 TIAM2Q8IVF5 1701 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 H0YIN7 160 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 GOLGA6L22H0YM25 854 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 ZBTB7BO15156 539 aaPredicted RBP14.16□□□□□ -0.14
USF1-201ENST00000368019 LMNB1P20700 586 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 IL6STP40189 918 aaPredicted RBP14.16□□□□□ -0.14
USF1-201ENST00000368019 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 C2CD5Q86YS7 1000 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 TNPO1Q92973 898 aaKnown RBP14.16□□□□□ -0.14
USF1-201ENST00000368019 IFT57Q9NWB7 429 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 BCORQ6W2J9 1755 aa14.16□□□□□ -0.14
USF1-201ENST00000368019 NFKBIEO00221 500 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 KCNQ3O43525 872 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 CDC45O75419 566 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 GNAI1P63096 354 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 BICDL1Q6ZP65 573 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 C16orf71Q8IYS4 520 aaPredicted RBP14.15□□□□□ -0.14
USF1-201ENST00000368019 MRPL50Q8N5N7 158 aaKnown RBP14.15□□□□□ -0.14
USF1-201ENST00000368019 KIF2CQ99661 725 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 API5Q9BZZ5 524 aaKnown RBP14.15□□□□□ -0.14
USF1-201ENST00000368019 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
USF1-201ENST00000368019 GLTPD2A6NH11 291 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 ESPNB1AK53 854 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 A1BGP04217 495 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 FMNL2Q96PY5 1086 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 PPP1R9BQ96SB3 815 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 BRIP1Q9BX63 1249 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 PCNTO95613 3336 aa14.14□□□□□ -0.15
USF1-201ENST00000368019 SLX4Q8IY92 1834 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 RRP9O43818 475 aaKnown RBP14.13□□□□□ -0.15
USF1-201ENST00000368019 VAMP4O75379 141 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 CAMTA2O94983 1202 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 HTRA3P83110 453 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 RABEP1Q15276 862 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 GLIPR1L2Q4G1C9 344 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 ARFGEF2Q9Y6D5 1785 aa14.13□□□□□ -0.15
USF1-201ENST00000368019 TPM2P07951 284 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 TERF1P54274 439 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 NUCB2P80303 420 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 KLRG1Q96E93 195 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 PANK2Q9BZ23 570 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 LNPKQ9C0E8 428 aa14.12□□□□□ -0.15
USF1-201ENST00000368019 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
USF1-201ENST00000368019 VEGFAP15692 232 aaPredicted RBP14.11□□□□□ -0.15
USF1-201ENST00000368019 PDE6BP35913 854 aa14.11□□□□□ -0.15
USF1-201ENST00000368019 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
USF1-201ENST00000368019 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms