RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
VAMP4-202ENST00000367740 ADARB2Q9NS39 739 aaKnown RBP19.94■□□□□ 0.78
VAMP4-202ENST00000367740 ZNF652Q9Y2D9 606 aa19.94■□□□□ 0.78
VAMP4-202ENST00000367740 TEFQ10587 303 aa19.93■□□□□ 0.78
VAMP4-202ENST00000367740 NOGQ13253 232 aa19.93■□□□□ 0.78
VAMP4-202ENST00000367740 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
VAMP4-202ENST00000367740 LARGE2Q8N3Y3 721 aa19.93■□□□□ 0.78
VAMP4-202ENST00000367740 GPRC5DQ9NZD1 345 aa19.93■□□□□ 0.78
VAMP4-202ENST00000367740 NIP7Q9Y221 180 aaKnown RBP eCLIP19.93■□□□□ 0.78
VAMP4-202ENST00000367740 FAM177BA6PVY3 158 aa19.92■□□□□ 0.78
VAMP4-202ENST00000367740 CRY2Q49AN0 593 aa19.92■□□□□ 0.78
VAMP4-202ENST00000367740 IL17REQ8NFR9 667 aa19.92■□□□□ 0.78
VAMP4-202ENST00000367740 ABCC12Q96J65 1359 aa19.92■□□□□ 0.78
VAMP4-202ENST00000367740 CC2D2BQ6DHV5 1058 aa19.91■□□□□ 0.78
VAMP4-202ENST00000367740 ZNF408Q9H9D4 720 aa19.91■□□□□ 0.78
VAMP4-202ENST00000367740 AKAP11Q9UKA4 1901 aa19.91■□□□□ 0.78
VAMP4-202ENST00000367740 POTEHQ6S545 545 aa19.9■□□□□ 0.78
VAMP4-202ENST00000367740 USP16Q9Y5T5 823 aa19.9■□□□□ 0.78
VAMP4-202ENST00000367740 KCNQ3O43525 872 aa19.89■□□□□ 0.77
VAMP4-202ENST00000367740 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
VAMP4-202ENST00000367740 SAGE1Q9NXZ1 904 aa19.89■□□□□ 0.77
VAMP4-202ENST00000367740 PGAP2Q9UHJ9 254 aa19.89■□□□□ 0.77
VAMP4-202ENST00000367740 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
VAMP4-202ENST00000367740 RGL2O15211 777 aa19.88■□□□□ 0.77
VAMP4-202ENST00000367740 NIM1KQ8IY84 436 aa19.88■□□□□ 0.77
VAMP4-202ENST00000367740 CEMIPQ8WUJ3 1361 aa19.87■□□□□ 0.77
VAMP4-202ENST00000367740 NPC1L1Q9UHC9 1359 aa19.87■□□□□ 0.77
VAMP4-202ENST00000367740 NUP98P52948 1817 aa19.87■□□□□ 0.77
VAMP4-202ENST00000367740 GNAT3A8MTJ3 354 aa19.86■□□□□ 0.77
VAMP4-202ENST00000367740 FAM155AB1AL88 458 aaPredicted RBP19.86■□□□□ 0.77
VAMP4-202ENST00000367740 HUNKP57058 714 aa19.86■□□□□ 0.77
VAMP4-202ENST00000367740 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
VAMP4-202ENST00000367740 PPIP5K2O43314 1243 aa19.85■□□□□ 0.77
VAMP4-202ENST00000367740 GMPSP49915 693 aaPredicted RBP19.85■□□□□ 0.77
VAMP4-202ENST00000367740 HIRAP54198 1017 aaPredicted RBP19.85■□□□□ 0.77
VAMP4-202ENST00000367740 HLFQ16534 295 aa19.85■□□□□ 0.77
VAMP4-202ENST00000367740 GRIPAP1Q4V328 841 aa19.85■□□□□ 0.77
VAMP4-202ENST00000367740 MKI67P46013 3256 aaKnown RBP19.85■□□□□ 0.77
VAMP4-202ENST00000367740 LAMB4A4D0S4 1761 aa19.85■□□□□ 0.77
VAMP4-202ENST00000367740 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
VAMP4-202ENST00000367740 GTF2E1P29083 439 aaPredicted RBP19.84■□□□□ 0.77
VAMP4-202ENST00000367740 HOXA10P31260 410 aaPredicted RBP19.84■□□□□ 0.77
VAMP4-202ENST00000367740 CXCL9Q07325 125 aa19.84■□□□□ 0.77
VAMP4-202ENST00000367740 AOC3Q16853 763 aa19.84■□□□□ 0.77
VAMP4-202ENST00000367740 NBPF10Q6P3W6 841 aaKnown RBP19.84■□□□□ 0.77
VAMP4-202ENST00000367740 NUTM1Q86Y26 1132 aa19.84■□□□□ 0.77
VAMP4-202ENST00000367740 NBPF15Q8N660 670 aa19.84■□□□□ 0.77
VAMP4-202ENST00000367740 ZC3H15Q8WU90 426 aaKnown RBP19.84■□□□□ 0.77
VAMP4-202ENST00000367740 KIF7Q2M1P5 1343 aa19.83■□□□□ 0.77
VAMP4-202ENST00000367740 CDHR2Q9BYE9 1310 aa19.83■□□□□ 0.77
VAMP4-202ENST00000367740 CDC37L1Q7L3B6 337 aa19.83■□□□□ 0.77
VAMP4-202ENST00000367740 TRPM4Q8TD43 1214 aa19.83■□□□□ 0.77
VAMP4-202ENST00000367740 RPGRQ92834 1020 aaKnown RBP19.83■□□□□ 0.77
VAMP4-202ENST00000367740 BTBD11A6QL63 1104 aa19.82■□□□□ 0.76
VAMP4-202ENST00000367740 PPEF1O14829 653 aaPredicted RBP19.82■□□□□ 0.76
VAMP4-202ENST00000367740 CTU1Q7Z7A3 348 aaKnown RBP19.82■□□□□ 0.76
VAMP4-202ENST00000367740 GAS2L2Q8NHY3 880 aa19.82■□□□□ 0.76
VAMP4-202ENST00000367740 RNF186Q9NXI6 227 aa19.82■□□□□ 0.76
VAMP4-202ENST00000367740 COL3A1P02461 1466 aaPredicted RBP19.81■□□□□ 0.76
VAMP4-202ENST00000367740 DIAPH1O60610 1272 aaKnown RBP19.81■□□□□ 0.76
VAMP4-202ENST00000367740 TRPA1O75762 1119 aa19.81■□□□□ 0.76
VAMP4-202ENST00000367740 RGMBQ6NW40 437 aa19.81■□□□□ 0.76
VAMP4-202ENST00000367740 DLK2Q6UY11 383 aa19.81■□□□□ 0.76
VAMP4-202ENST00000367740 ZNRF3Q9ULT6 936 aa19.81■□□□□ 0.76
VAMP4-202ENST00000367740 POLR2AP24928 1970 aaKnown RBP19.81■□□□□ 0.76
VAMP4-202ENST00000367740 TCERG1O14776 1098 aaKnown RBP19.8■□□□□ 0.76
VAMP4-202ENST00000367740 KIF23Q02241 960 aaPredicted RBP19.8■□□□□ 0.76
VAMP4-202ENST00000367740 NYXQ9GZU5 481 aa19.8■□□□□ 0.76
VAMP4-202ENST00000367740 HPS5Q9UPZ3 1129 aa19.8■□□□□ 0.76
VAMP4-202ENST00000367740 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
VAMP4-202ENST00000367740 CRAMP1Q96RY5 1269 aa19.79■□□□□ 0.76
VAMP4-202ENST00000367740 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
VAMP4-202ENST00000367740 IBTKQ9P2D0 1353 aaPredicted RBP19.79■□□□□ 0.76
VAMP4-202ENST00000367740 SHTN1A0MZ66 631 aa19.78■□□□□ 0.76
VAMP4-202ENST00000367740 SNRPA1P09661 255 aaKnown RBP19.78■□□□□ 0.76
VAMP4-202ENST00000367740 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
VAMP4-202ENST00000367740 USP48Q86UV5 1035 aa19.78■□□□□ 0.76
VAMP4-202ENST00000367740 VPS33BQ9H267 617 aa19.78■□□□□ 0.76
VAMP4-202ENST00000367740 RBM17Q96I25 401 aaKnown RBP19.77■□□□□ 0.76
VAMP4-202ENST00000367740 LAMB2P55268 1798 aa19.76■□□□□ 0.75
VAMP4-202ENST00000367740 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
VAMP4-202ENST00000367740 BCL2L13Q9BXK5 485 aa19.76■□□□□ 0.75
VAMP4-202ENST00000367740 GBA2Q9HCG7 927 aaPredicted RBP19.76■□□□□ 0.75
VAMP4-202ENST00000367740 HTTP42858 3142 aa19.76■□□□□ 0.75
VAMP4-202ENST00000367740 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
VAMP4-202ENST00000367740 RAD17O75943 681 aa19.75■□□□□ 0.75
VAMP4-202ENST00000367740 HABP4Q5JVS0 413 aaKnown RBP19.75■□□□□ 0.75
VAMP4-202ENST00000367740 C3orf67Q6ZVT6 689 aa19.75■□□□□ 0.75
VAMP4-202ENST00000367740 RTFDC1Q9BY42 306 aaPredicted RBP19.75■□□□□ 0.75
VAMP4-202ENST00000367740 SLC10A3P09131 477 aa19.74■□□□□ 0.75
VAMP4-202ENST00000367740 ZNF157P51786 506 aaPredicted RBP19.74■□□□□ 0.75
VAMP4-202ENST00000367740 CSRNP1Q96S65 589 aa19.74■□□□□ 0.75
VAMP4-202ENST00000367740 CNOT7Q9UIV1 285 aaKnown RBP19.74■□□□□ 0.75
VAMP4-202ENST00000367740 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
VAMP4-202ENST00000367740 DUOX1Q9NRD9 1551 aa19.74■□□□□ 0.75
VAMP4-202ENST00000367740 KIAA2012Q0VF49 1180 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 TNIP1Q15025 636 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 KRT26Q7Z3Y9 468 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 MICALL2Q8IY33 904 aa19.72■□□□□ 0.75
VAMP4-202ENST00000367740 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms