RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 GOLIM4O00461 696 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ANO6Q4KMQ2 910 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 AEBP2Q6ZN18 517 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-203ENST00000367505 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 MRPS27Q92552 414 aaKnown RBP9.53□□□□□ -0.88
SHPRH-203ENST00000367505 MEIS3Q99687 375 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 FEZ1Q99689 392 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 SLU7O95391 586 aaKnown RBP9.53□□□□□ -0.88
SHPRH-203ENST00000367505 SLC5A1P13866 664 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 DESP17661 470 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 SYKP43405 635 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ABCF2Q9UG63 623 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 BICRAQ9NZM4 1560 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 UBASH3AP57075 661 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 UHRF1BP1Q6BDS2 1440 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 CCDC194A0A1B0GVG4 234 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 PI4KAP2A4QPH2 592 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 GTF2F1P35269 517 aaKnown RBP eCLIP9.52□□□□□ -0.88
SHPRH-203ENST00000367505 PI4KAP1Q8N8J0 262 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 CCDC12Q8WUD4 166 aaPredicted RBP9.52□□□□□ -0.88
SHPRH-203ENST00000367505 TESK2Q96S53 571 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 RMND1Q9NWS8 449 aa9.52□□□□□ -0.88
SHPRH-203ENST00000367505 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.52□□□□□ -0.887e-8■■□□□ 14.4
SHPRH-203ENST00000367505 ANKRD24Q8TF21 1146 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 MAP3K2Q9Y2U5 619 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 KDM5BQ9UGL1 1544 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 GCOM1H8Y6P7 765 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-203ENST00000367505 MYZAPP0CAP1 466 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 DYDC1Q8WWB3 177 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
SHPRH-203ENST00000367505 KIF5BP33176 963 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 METAP2P50579 478 aaKnown RBP eCLIP9.52□□□□□ -0.89
SHPRH-203ENST00000367505 MAP2K1Q02750 393 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-203ENST00000367505 TMTC2Q8N394 836 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-203ENST00000367505 TCP11L1Q9NUJ3 509 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 DACT1Q9NYF0 836 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 ZMYM3Q14202 1370 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 BIN1O00499 593 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
SHPRH-203ENST00000367505 ZFYVE9O95405 1425 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 TTC21AQ8NDW8 1320 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 IFFO1Q0D2I5 559 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 RBM8AQ9Y5S9 174 aaKnown RBP9.51□□□□□ -0.89
SHPRH-203ENST00000367505 GOLGA6L10A0A0M3HER8 536 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 TYRO3Q06418 890 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-203ENST00000367505 ANKRD18BA2A2Z9 1011 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 SMC1AQ14683 1233 aaKnown RBP9.51□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC91Q7Z6B0 441 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 MKNK2Q9HBH9 465 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 MTIF2P46199 727 aaKnown RBP9.51□□□□□ -0.89
SHPRH-203ENST00000367505 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 CTTNBP2Q8WZ74 1663 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 RAD50Q92878 1312 aa9.51□□□□□ -0.89
SHPRH-203ENST00000367505 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 ZNF76P36508 570 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 NLRP5P59047 1200 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 BRF1Q92994 677 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 ZMYM4Q5VZL5 1548 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 LMAN1P49257 510 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 IFI16Q16666 785 aaKnown RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CEP112Q8N8E3 955 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 PHF8Q9UPP1 1060 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CPLX3Q8WVH0 158 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 PLCD4Q9BRC7 762 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 SPDYE4A6NLX3 237 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 VAMP4O75379 141 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 UBA7P41226 1012 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 TDRD12Q587J7 1177 aaKnown RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CALML4Q96GE6 196 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CWC25Q9NXE8 425 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 FANCAO15360 1455 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 N4BP3O15049 544 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CYLC1P35663 651 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 PLEKHM2Q8IWE5 1019 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 USP26Q9BXU7 913 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 COL17A1Q9UMD9 1497 aaPredicted RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC175P0C221 793 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 RLBP1P12271 317 aa9.5□□□□□ -0.89
SHPRH-203ENST00000367505 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
SHPRH-203ENST00000367505 CTAGE15A4D2H0 777 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CTAGE8P0CG41 777 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 MPRIPQ6WCQ1 1025 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CTAGE6Q86UF2 777 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CTAGE4Q8IX94 777 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 TTC12Q9H892 705 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 POLR3DP05423 398 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms